Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC245047.1-201ENST00000433276 873 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC009237.1-201ENST00000442127 744 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC004129.2-201ENST00000457229 287 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC096741.1-201ENST00000472250 846 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC006116.3-201ENST00000592968 361 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC022146.1-201ENST00000595307 847 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 TRIM51HP-202ENST00000530412 1823 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 CUBNP3-201ENST00000457461 1784 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 RN7SKP77-201ENST00000363261 353 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AL133325.1-201ENST00000421090 382 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC113412.1-201ENST00000425840 504 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC010463.3-201ENST00000594077 500 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 EIF3FP1-201ENST00000613970 806 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 RNA5SP171-201ENST00000391071 115 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AC126120.1-201ENST00000431082 470 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AC009120.3-201ENST00000563335 499 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AC132068.1-201ENST00000623805 459 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AC104118.1-201ENST00000607625 1589 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 TRIM60P19-201ENST00000452879 1462 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 U3.30-201ENST00000391308 210 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AC004975.1-201ENST00000428733 208 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 RPL7L1P9-201ENST00000431298 745 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 RPS18P6-201ENST00000476880 458 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AC126177.5-201ENST00000549599 178 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 AC091932.2-201ENST00000623014 291 ntBASIC5.6□□□□□ -1.51
CHD8Q9HCK8 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.6□□□□□ -1.51
CHD8Q9HCK8 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.59□□□□□ -1.51
CHD8Q9HCK8 AC127070.3-201ENST00000503695 3263 ntBASIC5.59□□□□□ -1.51
CHD8Q9HCK8 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms