Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM4Q9C037 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM4Q9C037 AC010266.2-201ENST00000564741 3255 ntBASIC6.3□□□□□ -1.4
TRIM4Q9C037 LINC01613-201ENST00000561476 2780 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM4Q9C037 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM4Q9C037 MTCO1P25-201ENST00000414449 1799 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM4Q9C037 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM4Q9C037 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM4Q9C037 RNA5SP510-201ENST00000364697 99 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 RN7SKP81-201ENST00000365603 331 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM4Q9C037 RPL23AP17-201ENST00000401064 499 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 VIM2P-201ENST00000402383 1294 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC079355.1-201ENST00000421770 223 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AL645939.3-201ENST00000435408 225 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC092106.2-201ENST00000436597 487 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 RN7SL39P-201ENST00000462264 297 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM4Q9C037 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC108043.1-201ENST00000512696 574 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM4Q9C037 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 SMIM12P1-201ENST00000603004 274 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 DIMT1P1-201ENST00000603970 763 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 AL512624.1-201ENST00000613638 469 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AL096712.1-201ENST00000614561 159 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 RNA5SP439-201ENST00000617595 124 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC006328.2-201ENST00000623198 397 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC012005.2-201ENST00000624333 397 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM4Q9C037 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 MAPK10-338ENST00000641647 3362 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM4Q9C037 BCORP1-203ENST00000513194 5093 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 AC109446.4-201ENST00000623235 2755 ntBASIC6.29□□□□□ -1.4
TRIM4Q9C037 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM4Q9C037 NEK2P2-201ENST00000438441 1338 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM4Q9C037 AC005005.4-201ENST00000623789 16698 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 RNA5SP485-201ENST00000365053 119 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 RNA5SP474-201ENST00000391234 90 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 AL590635.1-201ENST00000406314 586 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 CHEK2P5-201ENST00000423877 246 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 AC104843.2-201ENST00000427666 297 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 RPS10P21-201ENST00000430654 475 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 RN7SL654P-201ENST00000479178 292 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM4Q9C037 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 OR52H2P-201ENST00000514607 902 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 SETP17-201ENST00000534163 817 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 AC004232.2-201ENST00000574245 821 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 GLYATL1P2-202ENST00000588046 902 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 AC091167.5-201ENST00000605689 894 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 AL135999.3-201ENST00000610501 812 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.28□□□□□ -1.4
TRIM4Q9C037 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM4Q9C037 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM4Q9C037 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM4Q9C037 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms