Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 AC078880.4-201ENST00000617627 1749 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 AC024651.2-201ENST00000562480 2098 ntBASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 AL161901.1-201ENST00000624954 3425 ntBASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 RPL23AP17-201ENST00000401064 499 ntBASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 AC099782.1-201ENST00000425889 474 ntBASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 RPS29P14-201ENST00000431518 171 ntBASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 H3F3AP5-201ENST00000475267 429 ntBASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 HMGN1P16-201ENST00000508308 283 ntBASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 SNX18P25-201ENST00000510539 758 ntBASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 MIR4502-201ENST00000580432 81 ntBASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
UPF3BQ9BZI7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 SNORA77.2-201ENST00000408571 112 ntBASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 Z68694.1-201ENST00000413929 841 ntBASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 PTCD2P2-201ENST00000415579 1095 ntBASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 AC092651.1-201ENST00000426110 312 ntBASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 IGLV3-4-201ENST00000432300 244 ntBASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 SNORA74.1-201ENST00000516320 180 ntBASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.25□□□□□ -1.25
UPF3BQ9BZI7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 AP000547.3-204ENST00000588548 2523 ntBASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 SNORA51.1-201ENST00000363243 140 ntBASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 VN1R20P-201ENST00000425215 966 ntBASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 RAB28P2-201ENST00000454299 641 ntBASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 Z83838.1-202ENST00000456225 839 ntBASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.24□□□□□ -1.25
UPF3BQ9BZI7 AC095052.1-201ENST00000509955 863 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms