Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC104619.3-201ENST00000509116 1387 ntBASIC4.52□□□□□ -1.69
KRTAP3-1Q9BYR8 DCLRE1C-201ENST00000357717 2228 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-1Q9BYR8 OVGP1-201ENST00000369732 2243 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-1Q9BYR8 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRTAP3-1Q9BYR8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.52□□□□□ -1.69
KRTAP3-1Q9BYR8 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
KRTAP3-1Q9BYR8 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 LINC00663-203ENST00000586885 2546 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 IL17RD-202ENST00000320057 4474 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 C20orf173-201ENST00000246199 1034 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 IGKV7-3-201ENST00000357453 298 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RNU12-2P-201ENST00000364789 156 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 Y_RNA.301-201ENST00000364990 103 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RNU6-1026P-201ENST00000384465 108 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 MIR1-2-201ENST00000384961 85 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 IGKV1D-42-201ENST00000390278 373 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 REG3A-202ENST00000393878 1095 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 HIST1H2BPS2-201ENST00000402707 340 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 GAS8-AS1-201ENST00000408886 435 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RNU6-272P-201ENST00000411028 104 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 HMGB3P2-201ENST00000411913 584 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RPL37P10-201ENST00000412884 288 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 YBX1P8-201ENST00000421881 943 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AL355863.1-201ENST00000424331 293 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC008074.2-201ENST00000425381 429 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AL161447.1-201ENST00000427811 230 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC096644.2-201ENST00000429278 159 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC084851.3-201ENST00000432771 573 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 ZNF816-205ENST00000438970 491 ntTSL 4 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 NQO1-204ENST00000439109 924 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC245517.3-201ENST00000440562 250 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 C20orf173-204ENST00000444723 1059 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC073415.1-201ENST00000449240 153 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 MRPL21-202ENST00000450904 662 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RPL10AP3-201ENST00000462503 651 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RN7SL761P-201ENST00000463259 278 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RN7SL120P-201ENST00000463924 296 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 TAAR3P-201ENST00000466706 1078 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 GMFBP1-201ENST00000467831 427 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC073288.2-201ENST00000468232 664 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 TAAR3P-202ENST00000481759 1025 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RN7SL482P-201ENST00000487928 298 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RN7SL167P-201ENST00000498381 302 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AL449212.1-201ENST00000499853 517 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC008897.2-201ENST00000501886 527 ntTSL 4 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC091885.1-201ENST00000506658 268 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC233724.2-201ENST00000515727 271 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms