Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GAFA1Q96PS6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GAFA1Q96PS6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GAFA1Q96PS6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GAFA1Q96PS6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.98□□□□□ -1.61
GAFA1Q96PS6 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 CAP1P2-201ENST00000417455 1409 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC005225.5-201ENST00000623547 2225 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 ZNF840P-201ENST00000504759 1996 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 RNFT1P3-201ENST00000340898 1052 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 RNA5SP433-201ENST00000364491 114 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 RNU1-59P-201ENST00000364829 162 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 OR7E156P-201ENST00000400303 464 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 RPL23AP17-201ENST00000401064 499 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 RPS14P4-201ENST00000415880 418 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 GAPDHP75-201ENST00000433910 943 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AL445928.1-201ENST00000435545 222 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC110602.1-201ENST00000437414 318 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 BMS1P10-201ENST00000443754 1120 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC005244.1-201ENST00000582566 339 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC108673.3-201ENST00000609183 335 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 U1.25-201ENST00000614085 162 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 MIR6071-201ENST00000616741 78 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 U1.34-201ENST00000618578 162 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 U1.31-201ENST00000620022 160 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC025262.3-201ENST00000623666 360 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 OR8A1-204ENST00000642111 1145 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AC022164.1-201ENST00000568767 2673 ntBASIC4.97□□□□□ -1.61
GAFA1Q96PS6 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GAFA1Q96PS6 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.61
GAFA1Q96PS6 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.96□□□□□ -1.61
GAFA1Q96PS6 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
GAFA1Q96PS6 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.96□□□□□ -1.61
GAFA1Q96PS6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
GAFA1Q96PS6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 SELENOWP1-201ENST00000322792 252 ntBASIC4.96□□□□□ -1.62
GAFA1Q96PS6 RN7SKP77-201ENST00000363261 353 ntBASIC4.96□□□□□ -1.62
GAFA1Q96PS6 AL451142.1-201ENST00000375867 775 ntBASIC4.96□□□□□ -1.62
GAFA1Q96PS6 AC004386.1-201ENST00000393214 761 ntBASIC4.96□□□□□ -1.62
GAFA1Q96PS6 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 CXADRP1-201ENST00000398098 1095 ntBASIC4.96□□□□□ -1.62
GAFA1Q96PS6 AL354890.1-201ENST00000413730 346 ntBASIC4.96□□□□□ -1.62
GAFA1Q96PS6 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 KIF4CP-201ENST00000422742 1279 ntBASIC4.96□□□□□ -1.62
GAFA1Q96PS6 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 AC245884.2-201ENST00000426257 404 ntBASIC4.96□□□□□ -1.62
GAFA1Q96PS6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.96□□□□□ -1.62
GAFA1Q96PS6 GEMIN2P1-201ENST00000454246 752 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms