Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE4Q8N205 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE4Q8N205 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE4Q8N205 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC073429.2-201ENST00000569694 1444 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC005618.1-201ENST00000606901 3148 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE4Q8N205 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE4Q8N205 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE4Q8N205 SNORA58B-201ENST00000364259 136 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 RN7SKP161-201ENST00000411110 305 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 OR7E158P-201ENST00000524483 910 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC006530.1-201ENST00000555980 571 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 MIR4776-2-201ENST00000580204 80 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC211433.2-201ENST00000608433 387 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 AP002371.2-201ENST00000624450 503 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AL359195.2-201ENST00000623657 4412 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC023632.6-201ENST00000624338 2177 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.61□□□□□ -1.19
SYNE4Q8N205 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE4Q8N205 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE4Q8N205 AC027279.1-201ENST00000568885 4284 ntBASIC7.61□□□□□ -1.19
SYNE4Q8N205 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 AP002370.1-201ENST00000528055 1602 ntBASIC7.6□□□□□ -1.19
SYNE4Q8N205 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.6□□□□□ -1.19
SYNE4Q8N205 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 IGLV3-30-201ENST00000524362 298 ntBASIC7.6□□□□□ -1.19
SYNE4Q8N205 PCNAP4-201ENST00000532690 730 ntBASIC7.6□□□□□ -1.19
SYNE4Q8N205 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 AC005972.3-201ENST00000606304 481 ntBASIC7.6□□□□□ -1.19
SYNE4Q8N205 AC100814.1-201ENST00000606963 623 ntBASIC7.6□□□□□ -1.19
SYNE4Q8N205 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 AC110373.1-201ENST00000505994 3505 ntBASIC7.6□□□□□ -1.19
SYNE4Q8N205 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 Z93929.1-201ENST00000418200 1475 ntBASIC7.6□□□□□ -1.19
SYNE4Q8N205 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SYNE4Q8N205 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SYNE4Q8N205 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE4Q8N205 NEPNP-201ENST00000404786 1371 ntBASIC7.59□□□□□ -1.19
SYNE4Q8N205 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE4Q8N205 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.59□□□□□ -1.19
SYNE4Q8N205 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms