Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MAST4-IT1-201ENST00000514241 658 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC130365.2-201ENST00000525882 1201 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 uc_338.31-201ENST00000615595 186 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AP003789.1-201ENST00000617737 605 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AP001153.1-201ENST00000641024 338 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC114876.1-201ENST00000490962 1366 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC005225.5-201ENST00000623547 2225 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 RPL23AP17-201ENST00000401064 499 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AL132875.1-201ENST00000403623 949 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AL096829.1-201ENST00000413677 457 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 RPL12P12-201ENST00000424633 501 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 SEPT14P12-201ENST00000442280 560 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AC124945.1-201ENST00000485133 188 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 CR383658.1-201ENST00000514609 734 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 MRPS21P8-201ENST00000569196 235 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 OOSP1P2-201ENST00000579644 351 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 MIR4701-201ENST00000583094 63 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AL049840.6-201ENST00000604583 345 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AC073389.3-201ENST00000609434 935 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 AL357140.4-201ENST00000636827 412 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 DNM1P47-203ENST00000571780 12667 ntBASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC65Q8IXS2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 RN7SKP166-201ENST00000410812 305 ntBASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AC017078.1-201ENST00000416146 368 ntBASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 ZNF619P1-201ENST00000446539 752 ntBASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AL162739.1-201ENST00000450606 307 ntBASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 OR56A7P-201ENST00000524865 941 ntBASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 GTF2IP11-201ENST00000526931 420 ntBASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AL645933.2-201ENST00000606743 1207 ntBASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AC092681.3-201ENST00000609463 678 ntBASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AC096861.1-201ENST00000616652 240 ntBASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 AC073488.6-201ENST00000632293 754 ntBASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms