Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 RPL34P27-201ENST00000428810 349 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AL138899.2-201ENST00000439139 499 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 RPL7L1P3-201ENST00000455249 689 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC114728.1-201ENST00000488289 483 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 IGKV2-19-201ENST00000518132 283 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 OR56A7P-201ENST00000524865 941 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC079905.1-201ENST00000549280 475 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC090651.1-201ENST00000567865 634 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC090826.1-203ENST00000569235 490 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AL121768.1-201ENST00000613917 2544 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AP001153.1-201ENST00000641024 338 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AC079753.1-201ENST00000623243 3868 ntBASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
C9orf40Q8IXQ3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 TTC41P-205ENST00000551270 3963 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 OR10R3P-201ENST00000361688 942 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 RAB5CP1-201ENST00000395972 580 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AL096711.1-201ENST00000404780 554 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AL451046.1-201ENST00000406097 534 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 SNORA11.5-201ENST00000408163 128 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC015977.1-201ENST00000418887 292 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC115283.1-201ENST00000427353 400 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AL445466.1-201ENST00000448432 357 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC002075.1-201ENST00000457396 676 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 CST12P-201ENST00000457644 362 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 RN7SL352P-201ENST00000466002 277 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 TPM3P3-201ENST00000521343 354 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AP001804.1-201ENST00000526868 919 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC027369.2-201ENST00000528030 440 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 RPA2P1-201ENST00000556557 721 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 LINC00556-201ENST00000569603 412 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC119403.2-201ENST00000590960 598 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC096708.4-201ENST00000620563 552 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AL136228.1-201ENST00000622221 319 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 AC016583.1-201ENST00000624221 2431 ntBASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms