Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
SCUBE3Q8IX30 AC106800.1-201ENST00000501221 1362 ntBASIC8.46□□□□□ -1.06
SCUBE3Q8IX30 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
SCUBE3Q8IX30 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.46□□□□□ -1.06
SCUBE3Q8IX30 AC114786.1-201ENST00000512892 1415 ntBASIC8.46□□□□□ -1.06
SCUBE3Q8IX30 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.06
SCUBE3Q8IX30 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SCUBE3Q8IX30 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 UGT2B24P-201ENST00000514441 1597 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 THAP12P6-201ENST00000431978 2310 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 Y_RNA.58-201ENST00000362807 102 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 Y_RNA.154-201ENST00000363624 102 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 RNY3P1-201ENST00000365085 102 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 RNY3-201ENST00000365484 102 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 RNU6-31P-201ENST00000384388 108 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 Y_RNA.490-201ENST00000384413 102 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 RN7SKP58-201ENST00000411010 305 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC098592.2-201ENST00000413158 265 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 NCOR1P3-201ENST00000420479 303 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AL035410.1-201ENST00000427409 427 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 KRTAP9-11P-201ENST00000431013 525 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 RPS25P9-201ENST00000435591 252 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 BX842559.2-201ENST00000451418 605 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AL035407.2-201ENST00000454090 378 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 EIF3LP2-201ENST00000457262 807 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 RN7SL706P-201ENST00000460079 292 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 RPS20P4-201ENST00000461659 355 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC026254.1-201ENST00000479473 431 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 RPS7P6-201ENST00000485777 579 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 RPL15P21-201ENST00000495592 567 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AL031864.2-201ENST00000498507 350 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 ENPP7P3-201ENST00000509123 241 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC110792.2-201ENST00000510278 224 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC105914.1-201ENST00000511798 226 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 OR4C2P-201ENST00000530855 1064 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 MRPL40P1-201ENST00000542687 604 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC005230.1-201ENST00000555418 285 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AL359212.1-201ENST00000556608 614 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC103968.1-201ENST00000557841 573 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 MT1L-202ENST00000566367 78 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AL163952.1-202ENST00000569625 600 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC103710.1-201ENST00000610003 901 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 YWHAEP7-203ENST00000622054 312 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 MIR193BHG-210ENST00000641327 515 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC018880.1-201ENST00000418898 1319 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 AC114786.2-201ENST00000510090 1426 ntBASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SCUBE3Q8IX30 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 AC092162.3-201ENST00000624511 1624 ntBASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 OR4G1P-202ENST00000641173 1788 ntBASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 RNA5SP301-201ENST00000362537 121 ntBASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 SNORA51.2-201ENST00000364595 132 ntBASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 FANK1-201ENST00000368689 522 ntTSL 3 BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 RNU6-878P-201ENST00000384578 110 ntBASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC8.44□□□□□ -1.06
SCUBE3Q8IX30 FCF1P2-201ENST00000415284 583 ntBASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms