Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.88□□□□□ -1.15
COL16A1Q07092 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
COL16A1Q07092 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
COL16A1Q07092 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.87□□□□□ -1.15
COL16A1Q07092 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.87□□□□□ -1.15
COL16A1Q07092 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.87□□□□□ -1.15
COL16A1Q07092 RNA5SP478-201ENST00000364657 115 ntBASIC7.87□□□□□ -1.15
COL16A1Q07092 AC006335.2-201ENST00000437993 330 ntBASIC7.87□□□□□ -1.15
COL16A1Q07092 AL663074.2-201ENST00000440621 479 ntBASIC7.87□□□□□ -1.15
COL16A1Q07092 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.87□□□□□ -1.15
COL16A1Q07092 RN7SL51P-201ENST00000468230 285 ntBASIC7.87□□□□□ -1.15
COL16A1Q07092 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.87□□□□□ -1.15
COL16A1Q07092 RAB9BP1-201ENST00000519581 626 ntBASIC7.87□□□□□ -1.15
COL16A1Q07092 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
COL16A1Q07092 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
COL16A1Q07092 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
COL16A1Q07092 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC7.87□□□□□ -1.15
COL16A1Q07092 AC008937.3-201ENST00000606813 1700 ntBASIC7.87□□□□□ -1.15
COL16A1Q07092 AC009704.2-201ENST00000618739 483 ntBASIC7.87□□□□□ -1.15
COL16A1Q07092 AC087385.3-201ENST00000620477 187 ntBASIC7.87□□□□□ -1.15
COL16A1Q07092 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL16A1Q07092 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.87□□□□□ -1.15
COL16A1Q07092 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL16A1Q07092 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
COL16A1Q07092 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
COL16A1Q07092 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
COL16A1Q07092 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL16A1Q07092 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC7.86□□□□□ -1.15
COL16A1Q07092 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.86□□□□□ -1.15
COL16A1Q07092 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.86□□□□□ -1.15
COL16A1Q07092 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.86□□□□□ -1.15
COL16A1Q07092 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.86□□□□□ -1.15
COL16A1Q07092 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.86□□□□□ -1.15
COL16A1Q07092 MIR133B-201ENST00000362210 119 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
COL16A1Q07092 DUTP5-201ENST00000406790 469 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.86□□□□□ -1.15
COL16A1Q07092 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.86□□□□□ -1.15
COL16A1Q07092 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.86□□□□□ -1.15
COL16A1Q07092 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.86□□□□□ -1.15
COL16A1Q07092 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.86□□□□□ -1.15
COL16A1Q07092 BRD9P1-201ENST00000529855 560 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 AC106730.2-201ENST00000566641 540 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 MIR4260-201ENST00000583107 67 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 AC063977.5-201ENST00000601044 974 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.86□□□□□ -1.15
COL16A1Q07092 AC087283.1-201ENST00000604029 1074 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 AC139493.1-201ENST00000604368 397 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 OR9K1P-202ENST00000641111 3217 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
COL16A1Q07092 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
COL16A1Q07092 AC009962.1-201ENST00000567327 3813 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
COL16A1Q07092 AC105342.1-201ENST00000378334 6848 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
COL16A1Q07092 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.86□□□□□ -1.15
COL16A1Q07092 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.86□□□□□ -1.15
COL16A1Q07092 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
COL16A1Q07092 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL16A1Q07092 RNU4-4P-201ENST00000364588 130 ntBASIC7.85□□□□□ -1.15
COL16A1Q07092 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL16A1Q07092 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.85□□□□□ -1.15
COL16A1Q07092 TPT1P12-201ENST00000448968 492 ntBASIC7.85□□□□□ -1.15
COL16A1Q07092 RN7SL817P-201ENST00000480777 288 ntBASIC7.85□□□□□ -1.15
COL16A1Q07092 AC008897.1-201ENST00000494006 347 ntBASIC7.85□□□□□ -1.15
COL16A1Q07092 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.85□□□□□ -1.15
COL16A1Q07092 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.85□□□□□ -1.15
COL16A1Q07092 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.85□□□□□ -1.15
COL16A1Q07092 MAPK10-350ENST00000641777 965 ntBASIC7.85□□□□□ -1.15
COL16A1Q07092 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL16A1Q07092 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.85□□□□□ -1.15
COL16A1Q07092 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL16A1Q07092 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC7.85□□□□□ -1.15
COL16A1Q07092 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL16A1Q07092 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.85□□□□□ -1.15
COL16A1Q07092 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
COL16A1Q07092 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL16A1Q07092 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL16A1Q07092 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL16A1Q07092 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
COL16A1Q07092 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL16A1Q07092 AL080317.3-201ENST00000607434 4315 ntBASIC7.85□□□□□ -1.15
COL16A1Q07092 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL16A1Q07092 AC012618.3-205ENST00000637896 1496 ntBASIC7.85□□□□□ -1.15
COL16A1Q07092 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL16A1Q07092 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.85□□□□□ -1.15
COL16A1Q07092 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.85□□□□□ -1.15
COL16A1Q07092 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms