Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 TRBV5-2-201ENST00000489095 273 ntBASIC5.79□□□□□ -1.48
HMGCS1Q01581 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 RN7SKP288-201ENST00000516227 268 ntBASIC5.79□□□□□ -1.48
HMGCS1Q01581 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 AC093524.1-201ENST00000564266 1094 ntBASIC5.79□□□□□ -1.48
HMGCS1Q01581 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS1Q01581 AC119403.2-201ENST00000590960 598 ntBASIC5.79□□□□□ -1.48
HMGCS1Q01581 SNX18P3-202ENST00000565670 1750 ntBASIC5.79□□□□□ -1.48
HMGCS1Q01581 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS1Q01581 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS1Q01581 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS1Q01581 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS1Q01581 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS1Q01581 AC090181.3-201ENST00000624777 1514 ntBASIC5.79□□□□□ -1.48
HMGCS1Q01581 AC137056.2-201ENST00000624055 1958 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS1Q01581 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS1Q01581 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS1Q01581 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS1Q01581 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS1Q01581 RN7SKP171-201ENST00000364417 303 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 AL132875.1-201ENST00000403623 949 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 RPL35AP31-201ENST00000418340 337 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 AL139158.1-201ENST00000424719 340 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 AK3P5-201ENST00000432033 519 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 TIMM8BP2-201ENST00000445940 251 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 AC016027.4-201ENST00000450866 277 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS1Q01581 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 SDC4P-201ENST00000453285 601 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 AC113367.2-201ENST00000505749 160 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 HMGN1P17-201ENST00000513734 295 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 RN7SKP183-201ENST00000517169 324 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 NPIPB14P-203ENST00000532298 987 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 AP001267.4-201ENST00000602598 545 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 SMIM12P1-201ENST00000603004 274 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 AC009779.8-202ENST00000607990 932 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 AC005224.3-201ENST00000584683 2140 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 PPBPP2-201ENST00000513150 1362 ntBASIC5.78□□□□□ -1.48
HMGCS1Q01581 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS1Q01581 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HMGCS1Q01581 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCS1Q01581 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCS1Q01581 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCS1Q01581 DNM1P47-203ENST00000571780 12667 ntBASIC5.77□□□□□ -1.49
HMGCS1Q01581 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCS1Q01581 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 SNORA21-201ENST00000362423 132 ntBASIC5.77□□□□□ -1.49
HMGCS1Q01581 MIR188-201ENST00000385034 86 ntBASIC5.77□□□□□ -1.49
HMGCS1Q01581 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCS1Q01581 RN7SKP86-201ENST00000410454 332 ntBASIC5.77□□□□□ -1.49
HMGCS1Q01581 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 RPL12P16-201ENST00000431098 498 ntBASIC5.77□□□□□ -1.49
HMGCS1Q01581 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 snoU13.29-201ENST00000459370 104 ntBASIC5.77□□□□□ -1.49
HMGCS1Q01581 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 RN7SL362P-201ENST00000494228 267 ntBASIC5.77□□□□□ -1.49
HMGCS1Q01581 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 SUMO2P19-201ENST00000518920 295 ntBASIC5.77□□□□□ -1.49
HMGCS1Q01581 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 OR56A7P-201ENST00000524865 941 ntBASIC5.77□□□□□ -1.49
HMGCS1Q01581 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.77□□□□□ -1.49
HMGCS1Q01581 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCS1Q01581 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms