Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.69□□□□□ -1.34
TPM4P67936 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.69□□□□□ -1.34
TPM4P67936 NPM1P28-201ENST00000492269 840 ntBASIC6.69□□□□□ -1.34
TPM4P67936 AC093664.1-201ENST00000511779 289 ntBASIC6.69□□□□□ -1.34
TPM4P67936 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.69□□□□□ -1.34
TPM4P67936 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.69□□□□□ -1.34
TPM4P67936 AC103855.4-201ENST00000533158 265 ntBASIC6.69□□□□□ -1.34
TPM4P67936 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.69□□□□□ -1.34
TPM4P67936 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.69□□□□□ -1.34
TPM4P67936 AC084824.2-201ENST00000548906 345 ntBASIC6.69□□□□□ -1.34
TPM4P67936 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
TPM4P67936 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.69□□□□□ -1.34
TPM4P67936 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.69□□□□□ -1.34
TPM4P67936 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.69□□□□□ -1.34
TPM4P67936 AC022106.1-201ENST00000612834 766 ntBASIC6.69□□□□□ -1.34
TPM4P67936 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TPM4P67936 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.69□□□□□ -1.34
TPM4P67936 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.69□□□□□ -1.34
TPM4P67936 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TPM4P67936 AC130304.1-201ENST00000622942 2385 ntBASIC6.69□□□□□ -1.34
TPM4P67936 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TPM4P67936 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TPM4P67936 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TPM4P67936 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TPM4P67936 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.69□□□□□ -1.34
TPM4P67936 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TPM4P67936 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TPM4P67936 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TPM4P67936 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TPM4P67936 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TPM4P67936 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
TPM4P67936 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.68□□□□□ -1.34
TPM4P67936 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TPM4P67936 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TPM4P67936 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
TPM4P67936 RNA5SP485-201ENST00000365053 119 ntBASIC6.68□□□□□ -1.34
TPM4P67936 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
TPM4P67936 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TPM4P67936 AL138479.1-201ENST00000426913 484 ntBASIC6.68□□□□□ -1.34
TPM4P67936 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.68□□□□□ -1.34
TPM4P67936 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TPM4P67936 GAPDHP37-201ENST00000442317 968 ntBASIC6.68□□□□□ -1.34
TPM4P67936 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.68□□□□□ -1.34
TPM4P67936 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.68□□□□□ -1.34
TPM4P67936 RPL5P33-201ENST00000487833 905 ntBASIC6.68□□□□□ -1.34
TPM4P67936 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TPM4P67936 SNORA70.11-201ENST00000515987 138 ntBASIC6.68□□□□□ -1.34
TPM4P67936 SNORA70.13-201ENST00000516116 138 ntBASIC6.68□□□□□ -1.34
TPM4P67936 RN7SKP64-201ENST00000517206 328 ntBASIC6.68□□□□□ -1.34
TPM4P67936 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
TPM4P67936 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.68□□□□□ -1.34
TPM4P67936 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.68□□□□□ -1.34
TPM4P67936 PSMC1P8-201ENST00000536820 1296 ntBASIC6.68□□□□□ -1.34
TPM4P67936 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.68□□□□□ -1.34
TPM4P67936 AC090826.1-203ENST00000569235 490 ntBASIC6.68□□□□□ -1.34
TPM4P67936 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.68□□□□□ -1.34
TPM4P67936 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.68□□□□□ -1.34
TPM4P67936 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.68□□□□□ -1.34
TPM4P67936 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.68□□□□□ -1.34
TPM4P67936 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
TPM4P67936 AL355974.3-201ENST00000617383 467 ntBASIC6.68□□□□□ -1.34
TPM4P67936 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.68□□□□□ -1.34
TPM4P67936 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
TPM4P67936 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
TPM4P67936 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
TPM4P67936 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.68□□□□□ -1.34
TPM4P67936 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.68□□□□□ -1.34
TPM4P67936 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
TPM4P67936 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM4P67936 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
TPM4P67936 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
TPM4P67936 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM4P67936 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
TPM4P67936 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 RN7SKP81-201ENST00000365603 331 ntBASIC6.67□□□□□ -1.34
TPM4P67936 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.67□□□□□ -1.34
TPM4P67936 MRPL32P1-201ENST00000406301 247 ntBASIC6.67□□□□□ -1.34
TPM4P67936 AP003385.1-201ENST00000426387 893 ntBASIC6.67□□□□□ -1.34
TPM4P67936 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.67□□□□□ -1.34
TPM4P67936 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM4P67936 AL133351.3-201ENST00000454998 193 ntBASIC6.67□□□□□ -1.34
TPM4P67936 DEFB109A-201ENST00000482450 265 ntBASIC6.67□□□□□ -1.34
TPM4P67936 AC083795.1-201ENST00000491760 320 ntBASIC6.67□□□□□ -1.34
TPM4P67936 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.67□□□□□ -1.34
TPM4P67936 AC009567.2-201ENST00000502989 349 ntBASIC6.67□□□□□ -1.34
TPM4P67936 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 AC078899.1-201ENST00000521432 1185 ntBASIC6.67□□□□□ -1.34
TPM4P67936 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.67□□□□□ -1.34
TPM4P67936 OR9G2P-201ENST00000533326 880 ntBASIC6.67□□□□□ -1.34
TPM4P67936 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM4P67936 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
TPM4P67936 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.67□□□□□ -1.34
TPM4P67936 AC100832.2-201ENST00000582080 776 ntBASIC6.67□□□□□ -1.34
TPM4P67936 AC090241.1-201ENST00000587732 621 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms