Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.54□□□□□ -1.36
HDAC4P56524 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.54□□□□□ -1.36
HDAC4P56524 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.54□□□□□ -1.36
HDAC4P56524 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
HDAC4P56524 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC4P56524 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HDAC4P56524 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HDAC4P56524 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.54□□□□□ -1.36
HDAC4P56524 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC4P56524 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC4P56524 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HDAC4P56524 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.54□□□□□ -1.36
HDAC4P56524 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC4P56524 MIR433-201ENST00000384837 93 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HDAC4P56524 NPM1P38-201ENST00000403835 865 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 RN7SKP121-201ENST00000410842 305 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.54□□□□□ -1.36
HDAC4P56524 BX119904.3-201ENST00000428194 957 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.54□□□□□ -1.36
HDAC4P56524 GAPDHP75-201ENST00000433910 943 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 AC094019.1-201ENST00000434678 472 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 AL512637.1-201ENST00000439523 1231 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 CXCR2P1-202ENST00000443392 1074 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 MORF4-201ENST00000447135 971 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.54□□□□□ -1.36
HDAC4P56524 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.54□□□□□ -1.36
HDAC4P56524 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 RN7SL326P-201ENST00000477493 296 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 MTND3P6-201ENST00000485242 339 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HDAC4P56524 IGKV2-4-201ENST00000523070 340 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.54□□□□□ -1.36
HDAC4P56524 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.54□□□□□ -1.36
HDAC4P56524 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.54□□□□□ -1.36
HDAC4P56524 SNORA74.4-201ENST00000607595 199 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 AC012676.3-201ENST00000614983 479 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HDAC4P56524 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC4P56524 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HDAC4P56524 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.54□□□□□ -1.36
HDAC4P56524 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.54□□□□□ -1.36
HDAC4P56524 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC4P56524 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC4P56524 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.54□□□□□ -1.36
HDAC4P56524 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.54□□□□□ -1.36
HDAC4P56524 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.53□□□□□ -1.36
HDAC4P56524 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HDAC4P56524 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.53□□□□□ -1.36
HDAC4P56524 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HDAC4P56524 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HDAC4P56524 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.53□□□□□ -1.36
HDAC4P56524 AC092692.1-201ENST00000623625 2595 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 AP001541.1-201ENST00000623322 1904 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 RNA5SP346-201ENST00000363541 121 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 CXADRP1-201ENST00000398098 1095 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 NPM1P37-201ENST00000403105 874 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 VN1R12P-201ENST00000403778 876 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 RNA5SP198-201ENST00000410376 127 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 TMA16P2-201ENST00000413187 601 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.53□□□□□ -1.36
HDAC4P56524 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.53□□□□□ -1.36
HDAC4P56524 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.53□□□□□ -1.36
HDAC4P56524 AL133351.3-201ENST00000454998 193 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 RANP2-201ENST00000456833 229 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 H3F3AP5-201ENST00000475267 429 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.53□□□□□ -1.36
HDAC4P56524 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.53□□□□□ -1.36
HDAC4P56524 KHDC1P1-201ENST00000511053 508 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 RNU6-1334P-201ENST00000516032 105 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 RN7SKP5-201ENST00000517045 272 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.53□□□□□ -1.36
HDAC4P56524 AP001804.1-201ENST00000526868 919 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 OR4A40P-201ENST00000533878 948 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.53□□□□□ -1.36
HDAC4P56524 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.53□□□□□ -1.36
HDAC4P56524 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.53□□□□□ -1.36
HDAC4P56524 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.53□□□□□ -1.36
HDAC4P56524 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 OR4H6P-201ENST00000563771 921 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 AC005632.2-201ENST00000564271 828 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HDAC4P56524 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.53□□□□□ -1.36
HDAC4P56524 AL133406.3-201ENST00000606817 541 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 AL021368.3-201ENST00000607119 578 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.53□□□□□ -1.36
HDAC4P56524 AL591167.1-201ENST00000607321 456 ntBASIC6.53□□□□□ -1.36
HDAC4P56524 AC010998.3-201ENST00000613871 631 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms