Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.13□□□□□ -1.43
NR1H2P55055 AL731532.1-201ENST00000623972 4236 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NR1H2P55055 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NR1H2P55055 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NR1H2P55055 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.12□□□□□ -1.43
NR1H2P55055 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NR1H2P55055 RNU1-46P-201ENST00000384425 164 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NR1H2P55055 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.12□□□□□ -1.43
NR1H2P55055 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.12□□□□□ -1.43
NR1H2P55055 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.12□□□□□ -1.43
NR1H2P55055 AC093084.1-201ENST00000424233 687 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 AC007365.2-201ENST00000428806 458 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 AC007563.3-201ENST00000433233 371 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 CLNS1AP1-201ENST00000435954 682 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 SHQ1P1-201ENST00000437111 1544 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.12□□□□□ -1.43
NR1H2P55055 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
NR1H2P55055 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.12□□□□□ -1.43
NR1H2P55055 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
NR1H2P55055 AC236972.4-201ENST00000458091 963 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 AC009567.2-201ENST00000502989 349 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.12□□□□□ -1.43
NR1H2P55055 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.12□□□□□ -1.43
NR1H2P55055 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NR1H2P55055 PSMC1P4-201ENST00000515236 1327 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 RN7SKP11-201ENST00000517018 287 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NR1H2P55055 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.12□□□□□ -1.43
NR1H2P55055 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NR1H2P55055 AP000619.2-201ENST00000546014 969 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.12□□□□□ -1.43
NR1H2P55055 AL132640.1-201ENST00000559594 619 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NR1H2P55055 TMF1P1-201ENST00000576058 373 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.12□□□□□ -1.43
NR1H2P55055 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.12□□□□□ -1.43
NR1H2P55055 AC011447.2-201ENST00000592921 283 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.12□□□□□ -1.43
NR1H2P55055 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.12□□□□□ -1.43
NR1H2P55055 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.12□□□□□ -1.43
NR1H2P55055 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.12□□□□□ -1.43
NR1H2P55055 AC015660.5-201ENST00000623238 564 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 AP003499.2-201ENST00000624100 483 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 AP000577.1-201ENST00000624366 878 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 AC019080.5-201ENST00000624891 757 ntBASIC6.12□□□□□ -1.43
NR1H2P55055 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.12□□□□□ -1.43
NR1H2P55055 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.12□□□□□ -1.43
NR1H2P55055 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.12□□□□□ -1.43
NR1H2P55055 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.12□□□□□ -1.43
NR1H2P55055 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NR1H2P55055 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NR1H2P55055 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.12□□□□□ -1.43
NR1H2P55055 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.11□□□□□ -1.43
NR1H2P55055 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
NR1H2P55055 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.11□□□□□ -1.43
NR1H2P55055 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 AC093671.1-201ENST00000624981 2929 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NR1H2P55055 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NR1H2P55055 CCNB2P1-201ENST00000399411 1150 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 AL023284.3-201ENST00000407767 334 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 MIR1266-201ENST00000408125 84 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 RN7SKP205-201ENST00000410999 307 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.11□□□□□ -1.43
NR1H2P55055 Z82198.3-201ENST00000421145 199 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 CHCHD3P1-201ENST00000425516 676 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 AC092651.1-201ENST00000426110 312 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 AP003385.1-201ENST00000426387 893 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.11□□□□□ -1.43
NR1H2P55055 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.11□□□□□ -1.43
NR1H2P55055 MTCO3P43-201ENST00000440974 771 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.11□□□□□ -1.43
NR1H2P55055 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.11□□□□□ -1.43
NR1H2P55055 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.11□□□□□ -1.43
NR1H2P55055 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC067904.2-201ENST00000517322 1283 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.11□□□□□ -1.43
NR1H2P55055 GLYATL1P4-201ENST00000529326 906 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.11□□□□□ -1.43
NR1H2P55055 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.11□□□□□ -1.43
NR1H2P55055 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC092718.4-201ENST00000566639 716 ntBASIC6.11□□□□□ -1.43
NR1H2P55055 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.11□□□□□ -1.43
NR1H2P55055 AC036176.3-201ENST00000602456 418 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms