Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SOCS5P1-201ENST00000440415 949 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 EIF5AP4-201ENST00000441206 465 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 GAPDHP23-201ENST00000444823 993 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.17□□□□□ -1.42
LIMK2P53671 AC009963.3-201ENST00000458090 486 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 RPL12P31-201ENST00000478433 450 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 RN7SL104P-201ENST00000498686 293 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 AC090568.1-201ENST00000509499 856 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 KHDC1P1-201ENST00000511053 508 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.17□□□□□ -1.42
LIMK2P53671 RNA5SP206-201ENST00000516703 121 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK2P53671 AC036111.2-201ENST00000533247 901 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.17□□□□□ -1.42
LIMK2P53671 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.17□□□□□ -1.42
LIMK2P53671 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK2P53671 MIR132-201ENST00000591554 101 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 AC091167.5-201ENST00000605689 894 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 AL591167.1-201ENST00000607321 456 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.17□□□□□ -1.42
LIMK2P53671 AP001437.1-201ENST00000608783 456 ntBASIC6.17□□□□□ -1.42
LIMK2P53671 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.17□□□□□ -1.42
LIMK2P53671 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK2P53671 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK2P53671 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK2P53671 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK2P53671 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
LIMK2P53671 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK2P53671 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK2P53671 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 RNU1-49P-201ENST00000363468 159 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 RN7SKP269-201ENST00000365545 319 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.16□□□□□ -1.42
LIMK2P53671 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 IGLV3-4-201ENST00000432300 244 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 AC112492.2-201ENST00000432774 1030 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 AL365220.1-201ENST00000432923 399 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 MRPS21P3-201ENST00000436696 262 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 RBMY2AP-201ENST00000445405 1157 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
LIMK2P53671 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.16□□□□□ -1.42
LIMK2P53671 RBMY2CP-201ENST00000448575 1157 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.16□□□□□ -1.42
LIMK2P53671 RBMY2DP-202ENST00000448881 1157 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 AL451063.1-201ENST00000450164 1133 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 RAB28P2-201ENST00000454299 641 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.16□□□□□ -1.42
LIMK2P53671 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 RPL12P30-201ENST00000488389 499 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 SNX18P24-201ENST00000505249 671 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 OR4D12P-201ENST00000509361 911 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.16□□□□□ -1.42
LIMK2P53671 AC092865.1-201ENST00000544395 1023 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK2P53671 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK2P53671 RNU4ATAC-201ENST00000580972 127 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 SETP3-201ENST00000581726 813 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.16□□□□□ -1.42
LIMK2P53671 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK2P53671 AL352984.2-201ENST00000611153 546 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.16□□□□□ -1.42
LIMK2P53671 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK2P53671 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.16□□□□□ -1.42
LIMK2P53671 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.16□□□□□ -1.42
LIMK2P53671 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
LIMK2P53671 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.16□□□□□ -1.42
LIMK2P53671 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.16□□□□□ -1.42
LIMK2P53671 MTCO1P46-201ENST00000451639 1491 ntBASIC6.15□□□□□ -1.42
LIMK2P53671 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK2P53671 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK2P53671 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK2P53671 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK2P53671 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK2P53671 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.15□□□□□ -1.42
LIMK2P53671 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
LIMK2P53671 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK2P53671 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK2P53671 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
LIMK2P53671 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK2P53671 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
LIMK2P53671 AL121977.1-201ENST00000401636 979 ntBASIC6.15□□□□□ -1.42
LIMK2P53671 RN7SKP108-201ENST00000411367 328 ntBASIC6.15□□□□□ -1.42
LIMK2P53671 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.15□□□□□ -1.42
LIMK2P53671 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.15□□□□□ -1.42
LIMK2P53671 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LIMK2P53671 PNKDP1-201ENST00000435914 430 ntBASIC6.15□□□□□ -1.42
LIMK2P53671 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMK2P53671 AC094085.1-201ENST00000468914 584 ntBASIC6.15□□□□□ -1.42
LIMK2P53671 AC095052.1-201ENST00000509955 863 ntBASIC6.15□□□□□ -1.42
LIMK2P53671 IGKV2-4-201ENST00000523070 340 ntBASIC6.15□□□□□ -1.42
LIMK2P53671 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms