Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 API5-210ENST00000534600 1760 ntTSL 5 BASIC10.46□□□□□ -0.74
SMARCA2P51531 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA2P51531 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC10.45□□□□□ -0.74
SMARCA2P51531 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA2P51531 TMEM75-201ENST00000624314 2165 ntBASIC10.45□□□□□ -0.74
SMARCA2P51531 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
SMARCA2P51531 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA2P51531 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA2P51531 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA2P51531 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA2P51531 AL159987.1-201ENST00000347911 293 ntBASIC10.45□□□□□ -0.74
SMARCA2P51531 GAPDHP42-201ENST00000406848 981 ntBASIC10.45□□□□□ -0.74
SMARCA2P51531 GARSP1-201ENST00000570895 719 ntBASIC10.45□□□□□ -0.74
SMARCA2P51531 MIR4260-201ENST00000583107 67 ntBASIC10.45□□□□□ -0.74
SMARCA2P51531 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC10.45□□□□□ -0.74
SMARCA2P51531 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC10.45□□□□□ -0.74
SMARCA2P51531 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC10.45□□□□□ -0.74
SMARCA2P51531 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC10.45□□□□□ -0.74
SMARCA2P51531 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA2P51531 NCOA4P3-201ENST00000513203 1877 ntBASIC10.45□□□□□ -0.74
SMARCA2P51531 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA2P51531 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA2P51531 SELE-203ENST00000367775 3389 ntTSL 5 BASIC10.45□□□□□ -0.74
SMARCA2P51531 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA2P51531 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SMARCA2P51531 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC10.44□□□□□ -0.74
SMARCA2P51531 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SMARCA2P51531 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
SMARCA2P51531 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA2P51531 HIST1H3PS1-201ENST00000404612 417 ntBASIC10.44□□□□□ -0.74
SMARCA2P51531 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC10.44□□□□□ -0.74
SMARCA2P51531 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC10.44□□□□□ -0.74
SMARCA2P51531 SRSF1P1-201ENST00000424058 520 ntBASIC10.44□□□□□ -0.74
SMARCA2P51531 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC10.44□□□□□ -0.74
SMARCA2P51531 AL663074.2-201ENST00000440621 479 ntBASIC10.44□□□□□ -0.74
SMARCA2P51531 AC073610.1-201ENST00000489971 396 ntBASIC10.44□□□□□ -0.74
SMARCA2P51531 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC10.44□□□□□ -0.74
SMARCA2P51531 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC10.44□□□□□ -0.74
SMARCA2P51531 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
SMARCA2P51531 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC10.44□□□□□ -0.74
SMARCA2P51531 AL049779.2-201ENST00000553847 315 ntBASIC10.44□□□□□ -0.74
SMARCA2P51531 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC10.44□□□□□ -0.74
SMARCA2P51531 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC10.44□□□□□ -0.74
SMARCA2P51531 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC10.44□□□□□ -0.74
SMARCA2P51531 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA2P51531 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC10.44□□□□□ -0.74
SMARCA2P51531 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA2P51531 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA2P51531 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA2P51531 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC10.44□□□□□ -0.74
SMARCA2P51531 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA2P51531 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA2P51531 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SMARCA2P51531 RAB28P1-201ENST00000411517 641 ntBASIC10.43□□□□□ -0.74
SMARCA2P51531 SCARNA6.1-201ENST00000516989 238 ntBASIC10.43□□□□□ -0.74
SMARCA2P51531 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC10.43□□□□□ -0.74
SMARCA2P51531 AC022832.1-201ENST00000530718 645 ntBASIC10.43□□□□□ -0.74
SMARCA2P51531 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC10.43□□□□□ -0.74
SMARCA2P51531 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC10.43□□□□□ -0.74
SMARCA2P51531 MIR378J-201ENST00000611988 109 ntBASIC10.43□□□□□ -0.74
SMARCA2P51531 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC10.43□□□□□ -0.74
SMARCA2P51531 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA2P51531 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
SMARCA2P51531 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
SMARCA2P51531 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA2P51531 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC10.43□□□□□ -0.74
SMARCA2P51531 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA2P51531 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC10.43□□□□□ -0.74
SMARCA2P51531 AL157831.2-201ENST00000564681 3095 ntBASIC10.43□□□□□ -0.74
SMARCA2P51531 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA2P51531 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA2P51531 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA2P51531 AC019185.1-201ENST00000442718 389 ntBASIC10.43□□□□□ -0.74
SMARCA2P51531 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC10.43□□□□□ -0.74
SMARCA2P51531 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC10.43□□□□□ -0.74
SMARCA2P51531 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC10.43□□□□□ -0.74
SMARCA2P51531 OR4H6P-201ENST00000563771 921 ntBASIC10.43□□□□□ -0.74
SMARCA2P51531 MIR4697-201ENST00000582977 78 ntBASIC10.43□□□□□ -0.74
SMARCA2P51531 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC10.43□□□□□ -0.74
SMARCA2P51531 AC126915.2-201ENST00000610957 190 ntBASIC10.43□□□□□ -0.74
SMARCA2P51531 AL390318.1-201ENST00000624564 687 ntBASIC10.43□□□□□ -0.74
SMARCA2P51531 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA2P51531 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC10.42□□□□□ -0.74
SMARCA2P51531 RMST-210ENST00000640149 2844 ntTSL 5 BASIC10.42□□□□□ -0.74
SMARCA2P51531 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC10.42□□□□□ -0.74
SMARCA2P51531 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 RPL7P39-201ENST00000481157 744 ntBASIC10.42□□□□□ -0.74
SMARCA2P51531 PGAM1P13-201ENST00000507497 754 ntBASIC10.42□□□□□ -0.74
SMARCA2P51531 AC147055.3-201ENST00000510547 851 ntBASIC10.42□□□□□ -0.74
SMARCA2P51531 OR4A40P-201ENST00000533878 948 ntBASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms