Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HTTP42858 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
HTTP42858 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HTTP42858 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HTTP42858 RN7SKP27-201ENST00000410684 333 ntBASIC6.29□□□□□ -1.4
HTTP42858 NIFKP3-201ENST00000417799 865 ntBASIC6.29□□□□□ -1.4
HTTP42858 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.29□□□□□ -1.4
HTTP42858 RN7SL817P-201ENST00000480777 288 ntBASIC6.29□□□□□ -1.4
HTTP42858 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.29□□□□□ -1.4
HTTP42858 AC091905.4-201ENST00000623432 202 ntBASIC6.29□□□□□ -1.4
HTTP42858 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.29□□□□□ -1.4
HTTP42858 MAPK10-344ENST00000641718 3746 ntBASIC6.29□□□□□ -1.4
HTTP42858 ARHGAP42P2-201ENST00000416089 2140 ntBASIC6.29□□□□□ -1.4
HTTP42858 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HTTP42858 MAPK10-323ENST00000641493 3207 ntBASIC6.29□□□□□ -1.4
HTTP42858 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.29□□□□□ -1.4
HTTP42858 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HTTP42858 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HTTP42858 PWAR1-201ENST00000624188 2414 ntBASIC6.29□□□□□ -1.4
HTTP42858 MFSD8-239ENST00000641590 2479 ntBASIC6.28□□□□□ -1.4
HTTP42858 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.28□□□□□ -1.4
HTTP42858 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HTTP42858 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.28□□□□□ -1.4
HTTP42858 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC6.28□□□□□ -1.4
HTTP42858 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 RPL32P3-201ENST00000359025 275 ntBASIC6.28□□□□□ -1.4
HTTP42858 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.28□□□□□ -1.4
HTTP42858 AC112187.1-201ENST00000455837 479 ntBASIC6.28□□□□□ -1.4
HTTP42858 AL603882.1-201ENST00000463059 681 ntBASIC6.28□□□□□ -1.4
HTTP42858 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.28□□□□□ -1.4
HTTP42858 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.28□□□□□ -1.4
HTTP42858 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.28□□□□□ -1.4
HTTP42858 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HTTP42858 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC6.28□□□□□ -1.4
HTTP42858 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 IRF5P1-201ENST00000504852 2164 ntBASIC6.28□□□□□ -1.4
HTTP42858 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 TRGV7-201ENST00000427089 353 ntBASIC6.28□□□□□ -1.4
HTTP42858 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.28□□□□□ -1.4
HTTP42858 AC021678.3-201ENST00000517893 476 ntBASIC6.28□□□□□ -1.4
HTTP42858 AC127381.1-201ENST00000555979 939 ntBASIC6.28□□□□□ -1.4
HTTP42858 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.28□□□□□ -1.4
HTTP42858 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.28□□□□□ -1.4
HTTP42858 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.28□□□□□ -1.4
HTTP42858 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 FRY-202ENST00000380250 10688 ntTSL 5 BASIC6.28□□□□□ -1.4
HTTP42858 FRY-209ENST00000642040 10697 ntBASIC6.28□□□□□ -1.4
HTTP42858 KIAA1644-201ENST00000381176 6751 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HTTP42858 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.28□□□□□ -1.4
HTTP42858 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HTTP42858 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HTTP42858 RPS3AP38-201ENST00000435889 763 ntBASIC6.28□□□□□ -1.4
HTTP42858 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.28□□□□□ -1.4
HTTP42858 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.28□□□□□ -1.4
HTTP42858 AC106730.2-201ENST00000566641 540 ntBASIC6.28□□□□□ -1.4
HTTP42858 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.28□□□□□ -1.4
HTTP42858 MIR4311-201ENST00000580794 100 ntBASIC6.28□□□□□ -1.4
HTTP42858 AP000919.1-201ENST00000582850 985 ntBASIC6.28□□□□□ -1.4
HTTP42858 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC6.27□□□□□ -1.4
HTTP42858 MBP-206ENST00000397863 4800 ntTSL 3 BASIC6.27□□□□□ -1.4
HTTP42858 MIPEPP2-201ENST00000422560 1819 ntBASIC6.27□□□□□ -1.41
HTTP42858 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HTTP42858 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC6.27□□□□□ -1.41
HTTP42858 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
HTTP42858 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HTTP42858 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HTTP42858 RPL18P10-201ENST00000425606 538 ntBASIC6.27□□□□□ -1.41
HTTP42858 ACA64.4-201ENST00000459070 127 ntBASIC6.27□□□□□ -1.41
HTTP42858 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.27□□□□□ -1.41
HTTP42858 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.27□□□□□ -1.41
HTTP42858 AC005618.1-201ENST00000606901 3148 ntBASIC6.27□□□□□ -1.41
HTTP42858 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HTTP42858 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HTTP42858 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HTTP42858 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.27□□□□□ -1.41
HTTP42858 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.27□□□□□ -1.41
HTTP42858 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HTTP42858 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HTTP42858 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HTTP42858 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.27□□□□□ -1.41
HTTP42858 RN7SKP126-201ENST00000411143 300 ntBASIC6.27□□□□□ -1.41
HTTP42858 MYL6P5-201ENST00000412707 459 ntBASIC6.27□□□□□ -1.41
HTTP42858 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HTTP42858 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.27□□□□□ -1.41
HTTP42858 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.27□□□□□ -1.41
HTTP42858 AC008033.2-201ENST00000542626 177 ntBASIC6.27□□□□□ -1.41
HTTP42858 AL590392.1-201ENST00000604960 446 ntBASIC6.27□□□□□ -1.41
HTTP42858 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HTTP42858 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HTTP42858 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.27□□□□□ -1.41
HTTP42858 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms