Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN6P29350 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN6P29350 AC008055.1-201ENST00000547032 609 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN6P29350 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN6P29350 RN7SL230P-201ENST00000580835 303 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 RNU4ATAC-201ENST00000580972 127 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 AC015849.6-201ENST00000605454 474 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 AL137067.2-201ENST00000621202 131 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.85□□□□□ -1.47
PTPN6P29350 OR7E91P-202ENST00000642062 1198 ntBASIC5.85□□□□□ -1.47
PTPN6P29350 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.85□□□□□ -1.47
PTPN6P29350 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PTPN6P29350 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTPN6P29350 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN6P29350 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
PTPN6P29350 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN6P29350 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.84□□□□□ -1.47
PTPN6P29350 DDX18P6-201ENST00000450119 1997 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN6P29350 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PTPN6P29350 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.84□□□□□ -1.47
PTPN6P29350 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN6P29350 AL442128.2-201ENST00000620246 1824 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN6P29350 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
PTPN6P29350 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN6P29350 MIR621-201ENST00000384919 96 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN6P29350 RNA5SP198-201ENST00000410376 127 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 PTCD2P2-201ENST00000415579 1095 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.84□□□□□ -1.47
PTPN6P29350 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN6P29350 AC013268.2-201ENST00000420753 337 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 VN1R20P-201ENST00000425215 966 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 AC245884.2-201ENST00000426257 404 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 USP24P1-201ENST00000433802 779 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 AC010086.1-201ENST00000437359 1052 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN6P29350 TIMM8BP2-201ENST00000445940 251 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 VN1R96P-201ENST00000446052 858 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 AL161722.1-201ENST00000446972 1032 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN6P29350 RN7SL326P-201ENST00000477493 296 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN6P29350 EIF4EP5-201ENST00000528228 640 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN6P29350 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN6P29350 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.84□□□□□ -1.47
PTPN6P29350 AC107958.1-201ENST00000556576 290 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.84□□□□□ -1.47
PTPN6P29350 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN6P29350 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN6P29350 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN6P29350 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN6P29350 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
PTPN6P29350 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 AC010998.3-201ENST00000613871 631 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 AC069234.4-201ENST00000621276 412 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN6P29350 AL359091.1-201ENST00000449048 1734 ntBASIC5.84□□□□□ -1.47
PTPN6P29350 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN6P29350 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN6P29350 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN6P29350 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
PTPN6P29350 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN6P29350 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
PTPN6P29350 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN6P29350 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PTPN6P29350 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PTPN6P29350 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.84□□□□□ -1.48
PTPN6P29350 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.84□□□□□ -1.48
PTPN6P29350 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.84□□□□□ -1.48
PTPN6P29350 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PTPN6P29350 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN6P29350 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTPN6P29350 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
PTPN6P29350 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN6P29350 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PTPN6P29350 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN6P29350 AC093909.5-201ENST00000621839 1799 ntBASIC5.83□□□□□ -1.48
PTPN6P29350 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN6P29350 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.83□□□□□ -1.48
PTPN6P29350 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.83□□□□□ -1.48
PTPN6P29350 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN6P29350 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTPN6P29350 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTPN6P29350 RNU1-49P-201ENST00000363468 159 ntBASIC5.83□□□□□ -1.48
PTPN6P29350 AL096800.1-201ENST00000405326 893 ntBASIC5.83□□□□□ -1.48
PTPN6P29350 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms