Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC012065.3-201ENST00000602736 439 ntBASIC8.19□□□□□ -1.1
RFX1P22670 WBP1LP12-201ENST00000604449 331 ntBASIC8.19□□□□□ -1.1
RFX1P22670 AL451074.6-201ENST00000608512 729 ntBASIC8.19□□□□□ -1.1
RFX1P22670 AP002345.2-201ENST00000609961 904 ntBASIC8.19□□□□□ -1.1
RFX1P22670 AC012488.1-201ENST00000611221 640 ntBASIC8.19□□□□□ -1.1
RFX1P22670 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.19□□□□□ -1.1
RFX1P22670 FAM27E3-202ENST00000614611 340 ntBASIC8.19□□□□□ -1.1
RFX1P22670 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 AC018755.4-201ENST00000619715 454 ntBASIC8.19□□□□□ -1.1
RFX1P22670 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.19□□□□□ -1.1
RFX1P22670 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC8.19□□□□□ -1.1
RFX1P22670 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC8.19□□□□□ -1.1
RFX1P22670 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.19□□□□□ -1.1
RFX1P22670 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.19□□□□□ -1.1
RFX1P22670 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 AF131215.2-201ENST00000531549 1710 ntBASIC8.19□□□□□ -1.1
RFX1P22670 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC8.19□□□□□ -1.1
RFX1P22670 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.19□□□□□ -1.1
RFX1P22670 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.19□□□□□ -1.1
RFX1P22670 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.19□□□□□ -1.1
RFX1P22670 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.19□□□□□ -1.1
RFX1P22670 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.19□□□□□ -1.1
RFX1P22670 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
RFX1P22670 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RFX1P22670 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.18□□□□□ -1.1
RFX1P22670 AC008555.1-201ENST00000561778 2757 ntBASIC8.18□□□□□ -1.1
RFX1P22670 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC8.18□□□□□ -1.1
RFX1P22670 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.18□□□□□ -1.1
RFX1P22670 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC8.18□□□□□ -1.1
RFX1P22670 RNA5SP378-201ENST00000363646 120 ntBASIC8.18□□□□□ -1.1
RFX1P22670 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 MIR575-201ENST00000385013 94 ntBASIC8.18□□□□□ -1.1
RFX1P22670 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RFX1P22670 KRT18P52-201ENST00000404956 846 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AL109918.1-202ENST00000406724 436 ntBASIC8.18□□□□□ -1.1
RFX1P22670 LARP1P1-201ENST00000407692 292 ntBASIC8.18□□□□□ -1.1
RFX1P22670 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC8.18□□□□□ -1.1
RFX1P22670 Y_RNA.604-201ENST00000410574 102 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AL139135.1-201ENST00000412675 209 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AC105402.1-201ENST00000413336 545 ntBASIC8.18□□□□□ -1.1
RFX1P22670 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.18□□□□□ -1.1
RFX1P22670 AC009237.9-201ENST00000414800 347 ntBASIC8.18□□□□□ -1.1
RFX1P22670 NPM1P11-201ENST00000417106 855 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC8.18□□□□□ -1.1
RFX1P22670 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC8.18□□□□□ -1.1
RFX1P22670 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC8.18□□□□□ -1.1
RFX1P22670 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC8.18□□□□□ -1.1
RFX1P22670 AC234064.1-201ENST00000436312 247 ntBASIC8.18□□□□□ -1.1
RFX1P22670 RPL23AP76-201ENST00000441860 458 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC8.18□□□□□ -1.1
RFX1P22670 AL929288.2-201ENST00000446368 407 ntBASIC8.18□□□□□ -1.1
RFX1P22670 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 PSMC1P13-201ENST00000458195 985 ntBASIC8.18□□□□□ -1.1
RFX1P22670 RN7SL751P-201ENST00000473281 284 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AC090114.3-201ENST00000479267 829 ntBASIC8.18□□□□□ -1.1
RFX1P22670 RNU6-720P-201ENST00000516363 108 ntBASIC8.18□□□□□ -1.1
RFX1P22670 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
RFX1P22670 AP000619.1-201ENST00000540293 1000 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC8.18□□□□□ -1.1
RFX1P22670 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC8.18□□□□□ -1.1
RFX1P22670 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.18□□□□□ -1.1
RFX1P22670 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC8.18□□□□□ -1.1
RFX1P22670 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.18□□□□□ -1.1
RFX1P22670 AC006539.2-201ENST00000601729 572 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
RFX1P22670 AC009220.3-201ENST00000604318 586 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.18□□□□□ -1.1
RFX1P22670 AL136985.2-201ENST00000607372 535 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AC005332.10-201ENST00000612725 619 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AL391903.2-201ENST00000614532 247 ntBASIC8.18□□□□□ -1.1
RFX1P22670 AC116165.2-201ENST00000616705 206 ntBASIC8.18□□□□□ -1.1
RFX1P22670 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
RFX1P22670 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.18□□□□□ -1.1
RFX1P22670 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.18□□□□□ -1.1
RFX1P22670 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.18□□□□□ -1.1
RFX1P22670 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 ZNF833P-201ENST00000424938 1494 ntBASIC8.18□□□□□ -1.1
RFX1P22670 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RFX1P22670 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RFX1P22670 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 MT-RNR2-201ENST00000387347 1559 ntBASIC8.18□□□□□ -1.1
RFX1P22670 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.18□□□□□ -1.1
RFX1P22670 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
RFX1P22670 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC8.18□□□□□ -1.1
RFX1P22670 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms