Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNFT1P3-201ENST00000340898 1052 ntBASIC4.81□□□□□ -1.64
CD28P10747 RNA5SP273-201ENST00000362484 113 ntBASIC4.81□□□□□ -1.64
CD28P10747 RNA5SP350-201ENST00000363298 111 ntBASIC4.81□□□□□ -1.64
CD28P10747 RN7SKP69-201ENST00000365390 305 ntBASIC4.81□□□□□ -1.64
CD28P10747 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD28P10747 AL445238.1-204ENST00000400311 463 ntBASIC4.81□□□□□ -1.64
CD28P10747 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD28P10747 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.81□□□□□ -1.64
CD28P10747 RPL35AP31-201ENST00000418340 337 ntBASIC4.81□□□□□ -1.64
CD28P10747 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.81□□□□□ -1.64
CD28P10747 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.81□□□□□ -1.64
CD28P10747 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.81□□□□□ -1.64
CD28P10747 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC4.81□□□□□ -1.64
CD28P10747 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.81□□□□□ -1.64
CD28P10747 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC4.81□□□□□ -1.64
CD28P10747 AC092824.1-201ENST00000483524 576 ntBASIC4.81□□□□□ -1.64
CD28P10747 PSMA2P2-201ENST00000504319 686 ntBASIC4.81□□□□□ -1.64
CD28P10747 AC011411.1-201ENST00000509592 876 ntBASIC4.81□□□□□ -1.64
CD28P10747 RNA5SP438-201ENST00000516561 112 ntBASIC4.81□□□□□ -1.64
CD28P10747 RNA5SP271-201ENST00000516700 88 ntBASIC4.81□□□□□ -1.64
CD28P10747 AC022826.1-201ENST00000519383 805 ntBASIC4.81□□□□□ -1.64
CD28P10747 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.81□□□□□ -1.64
CD28P10747 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.81□□□□□ -1.64
CD28P10747 AL121579.2-201ENST00000555466 590 ntBASIC4.81□□□□□ -1.64
CD28P10747 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.81□□□□□ -1.64
CD28P10747 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC4.81□□□□□ -1.64
CD28P10747 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.81□□□□□ -1.64
CD28P10747 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC4.81□□□□□ -1.64
CD28P10747 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.81□□□□□ -1.64
CD28P10747 AC091193.1-201ENST00000604640 448 ntBASIC4.81□□□□□ -1.64
CD28P10747 AC016590.3-201ENST00000611171 753 ntBASIC4.81□□□□□ -1.64
CD28P10747 AC096708.4-201ENST00000620563 552 ntBASIC4.81□□□□□ -1.64
CD28P10747 AP001885.1-201ENST00000621658 558 ntBASIC4.81□□□□□ -1.64
CD28P10747 MIR4302-201ENST00000638058 60 ntBASIC4.81□□□□□ -1.64
CD28P10747 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CD28P10747 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC4.81□□□□□ -1.64
CD28P10747 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD28P10747 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CD28P10747 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD28P10747 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC4.81□□□□□ -1.64
CD28P10747 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.81□□□□□ -1.64
CD28P10747 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
CD28P10747 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD28P10747 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.81□□□□□ -1.64
CD28P10747 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC4.81□□□□□ -1.64
CD28P10747 AC022325.1-201ENST00000502748 2199 ntBASIC4.81□□□□□ -1.64
CD28P10747 AC022034.1-201ENST00000512867 2156 ntBASIC4.81□□□□□ -1.64
CD28P10747 AC105235.1-201ENST00000623208 1816 ntBASIC4.81□□□□□ -1.64
CD28P10747 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CD28P10747 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.81□□□□□ -1.64
CD28P10747 AL157831.2-201ENST00000564681 3095 ntBASIC4.81□□□□□ -1.64
CD28P10747 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.81□□□□□ -1.64
CD28P10747 RPS2P45-201ENST00000469997 2057 ntBASIC4.81□□□□□ -1.64
CD28P10747 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD28P10747 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CD28P10747 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CD28P10747 RBMY1HP-201ENST00000382759 1389 ntBASIC4.8□□□□□ -1.64
CD28P10747 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD28P10747 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CD28P10747 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CD28P10747 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.8□□□□□ -1.64
CD28P10747 AL117378.2-201ENST00000622916 1337 ntBASIC4.8□□□□□ -1.64
CD28P10747 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD28P10747 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD28P10747 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.8□□□□□ -1.64
CD28P10747 AC245096.1-201ENST00000413104 546 ntBASIC4.8□□□□□ -1.64
CD28P10747 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.8□□□□□ -1.64
CD28P10747 RPL12P16-201ENST00000431098 498 ntBASIC4.8□□□□□ -1.64
CD28P10747 FTLP8-201ENST00000446770 267 ntBASIC4.8□□□□□ -1.64
CD28P10747 AC092967.1-201ENST00000449016 481 ntBASIC4.8□□□□□ -1.64
CD28P10747 RPL31P15-201ENST00000449770 338 ntBASIC4.8□□□□□ -1.64
CD28P10747 CFL1P4-201ENST00000451536 498 ntBASIC4.8□□□□□ -1.64
CD28P10747 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.8□□□□□ -1.64
CD28P10747 SNORD46.2-201ENST00000516021 102 ntBASIC4.8□□□□□ -1.64
CD28P10747 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.8□□□□□ -1.64
CD28P10747 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.8□□□□□ -1.64
CD28P10747 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.8□□□□□ -1.64
CD28P10747 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.8□□□□□ -1.64
CD28P10747 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.8□□□□□ -1.64
CD28P10747 AC092121.1-201ENST00000569452 202 ntBASIC4.8□□□□□ -1.64
CD28P10747 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC4.8□□□□□ -1.64
CD28P10747 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC4.8□□□□□ -1.64
CD28P10747 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.8□□□□□ -1.64
CD28P10747 AC027243.2-201ENST00000602530 724 ntBASIC4.8□□□□□ -1.64
CD28P10747 AC108673.3-201ENST00000609183 335 ntBASIC4.8□□□□□ -1.64
CD28P10747 AC024255.1-201ENST00000614376 102 ntBASIC4.8□□□□□ -1.64
CD28P10747 AL357153.4-201ENST00000620487 1016 ntBASIC4.8□□□□□ -1.64
CD28P10747 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.8□□□□□ -1.64
CD28P10747 AC103703.1-201ENST00000634783 663 ntBASIC4.8□□□□□ -1.64
CD28P10747 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
CD28P10747 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CD28P10747 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.8□□□□□ -1.64
CD28P10747 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD28P10747 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CD28P10747 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD28P10747 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD28P10747 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD28P10747 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD28P10747 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CD28P10747 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms