Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL136116.2-201ENST00000404020 785 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 ZNF619P1-201ENST00000446539 752 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 RNU6-415P-201ENST00000516252 97 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 RNA5SP438-201ENST00000516561 112 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 IGLVIV-64-201ENST00000518581 301 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC068305.2-201ENST00000550567 1205 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC009303.3-201ENST00000591103 736 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC010615.3-201ENST00000597319 394 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC104820.1-201ENST00000624183 307 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-DOAP06340 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-DOAP06340 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-DOAP06340 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-DOAP06340 AL359922.2-201ENST00000581788 3017 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.27□□□□□ -1.25
HLA-DOAP06340 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HLA-DOAP06340 PSG10P-201ENST00000501199 1500 ntBASIC7.27□□□□□ -1.25
HLA-DOAP06340 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AC011369.2-201ENST00000624423 1567 ntBASIC7.26□□□□□ -1.25
HLA-DOAP06340 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 RPL7P51-201ENST00000490532 749 ntBASIC7.26□□□□□ -1.25
HLA-DOAP06340 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 IGKV3D-34-201ENST00000522638 302 ntBASIC7.26□□□□□ -1.25
HLA-DOAP06340 MTND1P6-201ENST00000523621 946 ntBASIC7.26□□□□□ -1.25
HLA-DOAP06340 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AC005244.1-201ENST00000582566 339 ntBASIC7.26□□□□□ -1.25
HLA-DOAP06340 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AL137067.2-201ENST00000621202 131 ntBASIC7.26□□□□□ -1.25
HLA-DOAP06340 AC106858.1-201ENST00000637497 429 ntBASIC7.26□□□□□ -1.25
HLA-DOAP06340 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
HLA-DOAP06340 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-DOAP06340 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-DOAP06340 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-DOAP06340 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 AP001541.1-201ENST00000623322 1904 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-DOAP06340 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 AC024587.1-201ENST00000505925 2157 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 AC114876.1-201ENST00000490962 1366 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-DOAP06340 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-DOAP06340 RN7SKP78-201ENST00000364711 318 ntBASIC7.25□□□□□ -1.25
HLA-DOAP06340 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-DOAP06340 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.25□□□□□ -1.25
HLA-DOAP06340 AL096829.1-201ENST00000413677 457 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms