Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
P04436 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
P04436 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
P04436 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
P04436 AL078595.2-201ENST00000605309 1780 ntBASIC5.6□□□□□ -1.51
P04436 AC008627.1-201ENST00000517511 1704 ntBASIC5.6□□□□□ -1.51
P04436 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
P04436 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
P04436 AL132656.3-201ENST00000606384 1595 ntBASIC5.59□□□□□ -1.51
P04436 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.59□□□□□ -1.51
P04436 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
P04436 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.59□□□□□ -1.51
P04436 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
P04436 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 HDAC1P2-201ENST00000453661 1398 ntBASIC5.59□□□□□ -1.51
P04436 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.59□□□□□ -1.51
P04436 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.59□□□□□ -1.51
P04436 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
P04436 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 AL096829.1-201ENST00000413677 457 ntBASIC5.59□□□□□ -1.51
P04436 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.59□□□□□ -1.51
P04436 VN1R3-201ENST00000418822 919 ntBASIC5.59□□□□□ -1.51
P04436 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.59□□□□□ -1.51
P04436 ZNF619P1-201ENST00000446539 752 ntBASIC5.59□□□□□ -1.51
P04436 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.59□□□□□ -1.51
P04436 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.59□□□□□ -1.51
P04436 RAB28P2-201ENST00000454299 641 ntBASIC5.59□□□□□ -1.51
P04436 AC103563.5-201ENST00000455643 364 ntBASIC5.59□□□□□ -1.51
P04436 ACA64.1-201ENST00000459171 127 ntBASIC5.59□□□□□ -1.51
P04436 AC073594.1-201ENST00000462065 364 ntBASIC5.59□□□□□ -1.51
P04436 AC083795.1-201ENST00000491760 320 ntBASIC5.59□□□□□ -1.51
P04436 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.59□□□□□ -1.51
P04436 AC027667.1-201ENST00000545814 304 ntBASIC5.59□□□□□ -1.51
P04436 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.59□□□□□ -1.51
P04436 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.59□□□□□ -1.51
P04436 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.59□□□□□ -1.51
P04436 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 AC090236.2-201ENST00000587933 1101 ntBASIC5.59□□□□□ -1.51
P04436 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.59□□□□□ -1.51
P04436 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
P04436 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.59□□□□□ -1.51
P04436 AL683813.2-201ENST00000605245 502 ntBASIC5.59□□□□□ -1.51
P04436 AL021368.3-201ENST00000607119 578 ntBASIC5.59□□□□□ -1.51
P04436 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.59□□□□□ -1.51
P04436 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.59□□□□□ -1.51
P04436 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
P04436 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
P04436 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
P04436 AC005034.3-201ENST00000604845 1747 ntBASIC5.59□□□□□ -1.51
P04436 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
P04436 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
P04436 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.59□□□□□ -1.52
P04436 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.58□□□□□ -1.52
P04436 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P04436 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P04436 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.58□□□□□ -1.52
P04436 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.58□□□□□ -1.52
P04436 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.58□□□□□ -1.52
P04436 AC096921.2-201ENST00000561507 1916 ntBASIC5.58□□□□□ -1.52
P04436 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
P04436 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.58□□□□□ -1.52
P04436 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P04436 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P04436 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.58□□□□□ -1.52
P04436 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.58□□□□□ -1.52
P04436 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.58□□□□□ -1.52
P04436 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
P04436 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
P04436 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
P04436 AC023490.2-201ENST00000359859 470 ntBASIC5.58□□□□□ -1.52
P04436 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.58□□□□□ -1.52
P04436 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.58□□□□□ -1.52
P04436 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.58□□□□□ -1.52
P04436 KATNBL1P2-201ENST00000433311 835 ntBASIC5.58□□□□□ -1.52
P04436 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.58□□□□□ -1.52
P04436 DNAJA1P5-201ENST00000440278 943 ntBASIC5.58□□□□□ -1.52
P04436 AC005077.1-201ENST00000449226 375 ntBASIC5.58□□□□□ -1.52
P04436 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.58□□□□□ -1.52
P04436 RN7SL352P-201ENST00000466002 277 ntBASIC5.58□□□□□ -1.52
P04436 AC068522.1-201ENST00000482895 345 ntBASIC5.58□□□□□ -1.52
P04436 AC114728.1-201ENST00000488289 483 ntBASIC5.58□□□□□ -1.52
P04436 AC025458.1-201ENST00000506046 166 ntBASIC5.58□□□□□ -1.52
P04436 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P04436 GTF2IP11-201ENST00000526931 420 ntBASIC5.58□□□□□ -1.52
P04436 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.58□□□□□ -1.52
P04436 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.58□□□□□ -1.52
P04436 AL096712.1-201ENST00000614561 159 ntBASIC5.58□□□□□ -1.52
P04436 AC096708.4-201ENST00000620563 552 ntBASIC5.58□□□□□ -1.52
P04436 AC024884.1-201ENST00000620583 399 ntBASIC5.58□□□□□ -1.52
P04436 AP001962.1-201ENST00000624114 559 ntBASIC5.58□□□□□ -1.52
P04436 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms