Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
LDLRP01130 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.07□□□□□ -1.44
LDLRP01130 UBE2V2P1-201ENST00000434717 398 ntBASIC6.07□□□□□ -1.44
LDLRP01130 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 SETP20-201ENST00000457046 852 ntBASIC6.07□□□□□ -1.44
LDLRP01130 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.07□□□□□ -1.44
LDLRP01130 AC128716.1-201ENST00000475129 166 ntBASIC6.07□□□□□ -1.44
LDLRP01130 AC093719.1-201ENST00000480427 441 ntBASIC6.07□□□□□ -1.44
LDLRP01130 RPL7AP23-201ENST00000482625 776 ntBASIC6.07□□□□□ -1.44
LDLRP01130 AL133372.1-201ENST00000493565 745 ntBASIC6.07□□□□□ -1.44
LDLRP01130 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LDLRP01130 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.07□□□□□ -1.44
LDLRP01130 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.07□□□□□ -1.44
LDLRP01130 AL162632.2-201ENST00000553933 399 ntBASIC6.07□□□□□ -1.44
LDLRP01130 AL121579.2-201ENST00000555466 590 ntBASIC6.07□□□□□ -1.44
LDLRP01130 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LDLRP01130 AC023968.1-201ENST00000560719 475 ntBASIC6.07□□□□□ -1.44
LDLRP01130 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.07□□□□□ -1.44
LDLRP01130 MIR3908-201ENST00000579798 126 ntBASIC6.07□□□□□ -1.44
LDLRP01130 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
LDLRP01130 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.07□□□□□ -1.44
LDLRP01130 AL353684.1-201ENST00000622677 1120 ntBASIC6.07□□□□□ -1.44
LDLRP01130 AL122023.1-201ENST00000622847 530 ntBASIC6.07□□□□□ -1.44
LDLRP01130 AC006328.2-201ENST00000623198 397 ntBASIC6.07□□□□□ -1.44
LDLRP01130 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.07□□□□□ -1.44
LDLRP01130 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.07□□□□□ -1.44
LDLRP01130 AC009120.7-201ENST00000623452 780 ntBASIC6.07□□□□□ -1.44
LDLRP01130 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LDLRP01130 AC012005.2-201ENST00000624333 397 ntBASIC6.07□□□□□ -1.44
LDLRP01130 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.07□□□□□ -1.44
LDLRP01130 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
LDLRP01130 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.07□□□□□ -1.44
LDLRP01130 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LDLRP01130 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LDLRP01130 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LDLRP01130 ZNF402P-201ENST00000404435 3100 ntBASIC6.06□□□□□ -1.44
LDLRP01130 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LDLRP01130 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LDLRP01130 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LDLRP01130 BIN2P1-201ENST00000504996 1530 ntBASIC6.06□□□□□ -1.44
LDLRP01130 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.06□□□□□ -1.44
LDLRP01130 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
LDLRP01130 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.06□□□□□ -1.44
LDLRP01130 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.06□□□□□ -1.44
LDLRP01130 SNORA51.1-201ENST00000363243 140 ntBASIC6.06□□□□□ -1.44
LDLRP01130 GNG5P2-201ENST00000372054 207 ntBASIC6.06□□□□□ -1.44
LDLRP01130 AL121835.1-201ENST00000404250 354 ntBASIC6.06□□□□□ -1.44
LDLRP01130 CYP4F30P-202ENST00000420048 405 ntBASIC6.06□□□□□ -1.44
LDLRP01130 RPL12P16-201ENST00000431098 498 ntBASIC6.06□□□□□ -1.44
LDLRP01130 AC108479.1-201ENST00000431142 427 ntBASIC6.06□□□□□ -1.44
LDLRP01130 AL590128.1-201ENST00000433407 286 ntBASIC6.06□□□□□ -1.44
LDLRP01130 LYPLA1P1-201ENST00000434514 622 ntBASIC6.06□□□□□ -1.44
LDLRP01130 AC003989.1-201ENST00000434569 565 ntBASIC6.06□□□□□ -1.44
LDLRP01130 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.06□□□□□ -1.44
LDLRP01130 AL451063.1-201ENST00000450164 1133 ntBASIC6.06□□□□□ -1.44
LDLRP01130 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.06□□□□□ -1.44
LDLRP01130 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LDLRP01130 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.06□□□□□ -1.44
LDLRP01130 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.06□□□□□ -1.44
LDLRP01130 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.06□□□□□ -1.44
LDLRP01130 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.06□□□□□ -1.44
LDLRP01130 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.06□□□□□ -1.44
LDLRP01130 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.06□□□□□ -1.44
LDLRP01130 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.06□□□□□ -1.44
LDLRP01130 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.06□□□□□ -1.44
LDLRP01130 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LDLRP01130 AC002519.2-203ENST00000567043 837 ntBASIC6.06□□□□□ -1.44
LDLRP01130 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.06□□□□□ -1.44
LDLRP01130 AC009237.12-201ENST00000604755 742 ntBASIC6.06□□□□□ -1.44
LDLRP01130 AL135999.3-201ENST00000610501 812 ntBASIC6.06□□□□□ -1.44
LDLRP01130 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.06□□□□□ -1.44
LDLRP01130 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
LDLRP01130 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
LDLRP01130 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LDLRP01130 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LDLRP01130 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
LDLRP01130 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.05□□□□□ -1.44
LDLRP01130 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LDLRP01130 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LDLRP01130 RNA5SP77-201ENST00000365394 120 ntBASIC6.05□□□□□ -1.44
LDLRP01130 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
LDLRP01130 CASKP1-201ENST00000412870 582 ntBASIC6.05□□□□□ -1.44
LDLRP01130 Z68694.1-201ENST00000413929 841 ntBASIC6.05□□□□□ -1.44
LDLRP01130 UBE2V1P14-201ENST00000415815 558 ntBASIC6.05□□□□□ -1.44
LDLRP01130 NME1P1-201ENST00000420914 382 ntBASIC6.05□□□□□ -1.44
LDLRP01130 AC007562.1-201ENST00000421819 517 ntBASIC6.05□□□□□ -1.44
LDLRP01130 SETP9-201ENST00000423837 832 ntBASIC6.05□□□□□ -1.44
LDLRP01130 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.05□□□□□ -1.44
LDLRP01130 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.05□□□□□ -1.44
LDLRP01130 AL390879.1-201ENST00000439143 386 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms