Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 HSPD1P9-201ENST00000420325 1636 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 AC020656.2-201ENST00000613291 5309 ntBASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA3F8WFD2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 RN7SKP275-201ENST00000364626 301 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 UBE2V1P14-201ENST00000415815 558 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 RFESDP1-201ENST00000422350 461 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AC098847.1-201ENST00000473094 348 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 TRBV8-1-201ENST00000481590 279 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 RBBP4P1-201ENST00000502424 1276 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 OR7E99P-201ENST00000505750 922 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 UGT2A3P7-201ENST00000510485 734 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AP005639.1-201ENST00000526939 192 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AC073916.1-201ENST00000545095 130 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AC007346.1-201ENST00000569208 867 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AP000919.1-201ENST00000582850 985 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AC067773.1-201ENST00000603284 1094 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AC073389.3-201ENST00000609434 935 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AL080312.2-201ENST00000613001 630 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 AC107905.1-201ENST00000616204 426 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 FAM27E2-201ENST00000619668 403 ntBASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
NPIPA3F8WFD2 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AC007342.9-201ENST00000623877 1385 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 WBP11P1-201ENST00000562560 1931 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AC011369.2-201ENST00000624423 1567 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 RNA5SP346-201ENST00000363541 121 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 RN7SKP269-201ENST00000365545 319 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AL589994.1-201ENST00000404962 340 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AL355355.1-201ENST00000442900 793 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AL590004.3-202ENST00000445883 451 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 VPS25P1-201ENST00000455691 508 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AC010343.2-201ENST00000510162 224 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 RNU6-1334P-201ENST00000516032 105 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 GTF2IP11-201ENST00000526931 420 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 AC027369.2-201ENST00000528030 440 ntBASIC5.68□□□□□ -1.5
NPIPA3F8WFD2 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms