Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC105749.1-201ENST00000631338 2008 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AL355377.1-201ENST00000621125 1653 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 U3.43-201ENST00000410734 213 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 RN7SKP108-201ENST00000411367 328 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC097721.1-201ENST00000427150 1253 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 PNKDP1-201ENST00000435914 430 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 DNAJA1P5-201ENST00000440278 943 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 VN1R96P-201ENST00000446052 858 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC135999.1-201ENST00000478962 479 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 RPS26P24-201ENST00000497656 331 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 OR4D12P-201ENST00000509361 911 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 RN7SKP35-201ENST00000517210 151 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 IGKV2-4-201ENST00000523070 340 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 KCTD9P4-201ENST00000526766 1166 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC036111.2-201ENST00000533247 901 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC009120.3-201ENST00000563335 499 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC090826.1-203ENST00000569235 490 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AP005136.2-201ENST00000583253 1049 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC011497.2-201ENST00000600255 639 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AL136984.1-201ENST00000607611 1893 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 HSPD1P9-201ENST00000420325 1636 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 AC020656.2-201ENST00000613291 5309 ntBASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPIPA2E9PIF3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 RN7SKP275-201ENST00000364626 301 ntBASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 AL353626.3-201ENST00000413399 657 ntBASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 UBE2V1P14-201ENST00000415815 558 ntBASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 AC117434.1-201ENST00000419971 836 ntBASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 AC098847.1-201ENST00000473094 348 ntBASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.69□□□□□ -1.5
NPIPA2E9PIF3 RBBP4P1-201ENST00000502424 1276 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms