Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC124891.1-201ENST00000536322 519 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC244502.2-201ENST00000543361 851 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 TDGP1-201ENST00000543961 1229 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AP000619.2-201ENST00000546014 969 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 HNRNPCP1-201ENST00000556181 766 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC026898.1-201ENST00000586404 571 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AL589765.6-201ENST00000601909 549 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 GAPDHP41-201ENST00000613707 975 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC116667.2-201ENST00000641075 823 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC114876.1-201ENST00000490962 1366 ntBASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RHBDD3Q9Y3P4 CDC27P2-201ENST00000425026 1922 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AC068870.3-201ENST00000625077 2536 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 YWHAZP4-201ENST00000392459 708 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AC007068.1-201ENST00000396690 844 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AL445213.1-201ENST00000412589 747 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 USP24P1-201ENST00000433802 779 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AL390879.1-201ENST00000439143 386 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 OR2L9P-201ENST00000444456 913 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AC112187.1-201ENST00000455837 479 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 RANP2-201ENST00000456833 229 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 RARRES2P3-201ENST00000457739 473 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 RBMY2HP-201ENST00000457961 720 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 RN7SL393P-201ENST00000463588 296 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AC004890.3-201ENST00000605566 1095 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AC089999.3-201ENST00000622440 577 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 CAP1P2-201ENST00000417455 1409 ntBASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.38□□□□□ -1.55
RHBDD3Q9Y3P4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 SNORA64.3-201ENST00000365647 134 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms