Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 SSX8-201ENST00000506270 579 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 FABP5P5-201ENST00000515537 406 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 SCARNA11.1-201ENST00000516918 132 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AP005597.2-201ENST00000526238 341 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 CKS1BP1-201ENST00000555221 240 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AL109628.1-201ENST00000556877 366 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 OOSP1P2-201ENST00000579644 351 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SL178P-201ENST00000582930 304 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC005518.2-201ENST00000603254 282 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 MTND3P19-201ENST00000603825 345 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC018618.2-201ENST00000604770 446 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SL680P-201ENST00000620379 299 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC002550.2-201ENST00000621246 394 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC129908.1-201ENST00000624553 648 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AL359396.1-201ENST00000623151 2376 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC090181.3-201ENST00000624777 1514 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 VDAC1P2-201ENST00000423609 850 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 RPL5P34-201ENST00000426545 891 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AL591212.2-201ENST00000433923 257 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC244505.2-201ENST00000435089 759 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 RPL14P5-201ENST00000436474 730 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 DNAJA1P5-201ENST00000440278 943 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SL741P-201ENST00000482473 289 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 OR9A1P-202ENST00000484361 945 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 Y_RNA.701-201ENST00000516812 110 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 SNORA76.2-201ENST00000517095 137 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 LYZ-202ENST00000548839 558 ntTSL 2 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC093012.1-202ENST00000549403 582 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AL157394.1-201ENST00000562983 1224 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SL32P-201ENST00000580514 281 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 MIR3668-201ENST00000582138 75 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 DUXAP11-201ENST00000603858 526 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 DPRXP5-201ENST00000604662 539 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC112220.3-201ENST00000605502 502 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC113361.1-201ENST00000606683 543 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AL021707.7-201ENST00000607991 416 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AC073488.8-201ENST00000631952 757 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 AL161891.1-201ENST00000621575 4636 ntBASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC9.41□□□□□ -0.9
PDZRN3Q9UPQ7 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AL031123.3-201ENST00000623345 1837 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms