Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AL358876.1-201ENST00000453364 1075 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 PPIAP27-201ENST00000453800 265 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AC130365.2-201ENST00000525882 1201 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AC092865.1-201ENST00000544395 1023 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 AC233702.7-202ENST00000582941 211 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 OR7A8P-201ENST00000595427 913 ntBASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CLIP2Q9UDT6 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.24
CLIP2Q9UDT6 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
CLIP2Q9UDT6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 RNU1-134P-201ENST00000362935 165 ntBASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 RN7SKP161-201ENST00000411110 305 ntBASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 OR3D1P-201ENST00000438288 955 ntBASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 AC002553.3-201ENST00000453002 341 ntBASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 LSM3P4-201ENST00000502948 309 ntBASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 CR383658.1-201ENST00000514609 734 ntBASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 AC021269.1-201ENST00000526860 705 ntBASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 AC068768.2-201ENST00000602352 343 ntBASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 AC015982.1-201ENST00000608113 465 ntBASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 AL445649.1-201ENST00000615941 691 ntBASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP2Q9UDT6 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 AC079753.1-201ENST00000623243 3868 ntBASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 MIR433-201ENST00000384837 93 ntBASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 RNA5SP156-201ENST00000410250 110 ntBASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 GAPDHP23-201ENST00000444823 993 ntBASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 RN7SKP238-201ENST00000516483 249 ntBASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 AC007494.1-201ENST00000562293 760 ntBASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 AL365181.4-201ENST00000609800 547 ntBASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 AL157762.1-201ENST00000619612 415 ntBASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CLIP2Q9UDT6 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms