Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.46□□□□□ -1.53
CLCF1Q9UBD9 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.46□□□□□ -1.53
CLCF1Q9UBD9 DOCK11P1-201ENST00000553480 5932 ntBASIC5.46□□□□□ -1.53
CLCF1Q9UBD9 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.46□□□□□ -1.53
CLCF1Q9UBD9 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLCF1Q9UBD9 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
CLCF1Q9UBD9 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 HDAC1P2-201ENST00000453661 1398 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 OR13K1P-201ENST00000444577 975 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 ZNF619P1-201ENST00000446539 752 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AC016724.1-201ENST00000453215 421 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AC068522.1-201ENST00000482895 345 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 SCARNA18.1-201ENST00000516330 83 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 OR6M2P-201ENST00000529831 871 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AP005119.1-201ENST00000580956 292 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AC024589.2-201ENST00000605642 1294 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AL645933.2-201ENST00000606743 1207 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AC108673.3-201ENST00000609183 335 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AC011815.2-201ENST00000618230 2021 ntBASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCF1Q9UBD9 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AC119674.1-213ENST00000641177 1386 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AC092692.1-201ENST00000623625 2595 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 RNA5SP477-201ENST00000362639 119 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 RN7SKP161-201ENST00000411110 305 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 HMGN1P20-201ENST00000411849 300 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 RPL12P12-201ENST00000424633 501 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 MRPS21P3-201ENST00000436696 262 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AL512593.1-201ENST00000444758 779 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AL022237.1-201ENST00000446663 358 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AC005077.1-201ENST00000449226 375 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 RPS27AP3-201ENST00000453803 454 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 HLA-DPA3-207ENST00000454398 229 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AC141002.1-201ENST00000607025 279 ntBASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.45□□□□□ -1.54
CLCF1Q9UBD9 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms