Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL589647.1-201ENST00000402485 466 ntBASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 RPS3AP15-201ENST00000483874 781 ntBASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AC008897.1-201ENST00000494006 347 ntBASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 RNA5SP91-201ENST00000390902 119 ntBASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AL035419.1-201ENST00000397037 564 ntBASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AC011477.5-201ENST00000586571 259 ntBASIC5.63□□□□□ -1.51
CHD8Q9HCK8 BUB1P1-201ENST00000603541 607 ntBASIC5.63□□□□□ -1.51
CHD8Q9HCK8 MIR6085-201ENST00000618314 110 ntBASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CHD8Q9HCK8 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 RN7SL41P-201ENST00000476144 297 ntBASIC5.62□□□□□ -1.51
CHD8Q9HCK8 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 AC034205.1-201ENST00000520621 638 ntBASIC5.62□□□□□ -1.51
CHD8Q9HCK8 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 AL021918.2-201ENST00000613415 194 ntBASIC5.62□□□□□ -1.51
CHD8Q9HCK8 AC096861.1-201ENST00000616652 240 ntBASIC5.62□□□□□ -1.51
CHD8Q9HCK8 AC087385.3-201ENST00000620477 187 ntBASIC5.62□□□□□ -1.51
CHD8Q9HCK8 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 OR7E157P-201ENST00000494376 911 ntBASIC5.62□□□□□ -1.51
CHD8Q9HCK8 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 AC137056.2-201ENST00000624055 1958 ntBASIC5.62□□□□□ -1.51
CHD8Q9HCK8 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CHD8Q9HCK8 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC093166.4-201ENST00000457867 318 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC090589.1-201ENST00000473109 362 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 CR383656.1-201ENST00000484916 377 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC026688.1-201ENST00000520639 1168 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.61□□□□□ -1.51
CHD8Q9HCK8 MIR6780A-201ENST00000615089 68 ntBASIC5.61□□□□□ -1.51
CHD8Q9HCK8 AL354718.1-201ENST00000619764 589 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms