Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ABCA3Q99758 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
ABCA3Q99758 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
ABCA3Q99758 AC005294.1-201ENST00000355509 281 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.75□□□□□ -1.17
ABCA3Q99758 AC015977.1-201ENST00000418887 292 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 NENFP1-201ENST00000419476 466 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 RN7SL165P-201ENST00000477476 291 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.75□□□□□ -1.17
ABCA3Q99758 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.75□□□□□ -1.17
ABCA3Q99758 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.75□□□□□ -1.17
ABCA3Q99758 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.75□□□□□ -1.17
ABCA3Q99758 AC087763.1-201ENST00000603391 286 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
ABCA3Q99758 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.75□□□□□ -1.17
ABCA3Q99758 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 AC009166.2-201ENST00000624410 2833 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
ABCA3Q99758 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC7.75□□□□□ -1.17
ABCA3Q99758 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.75□□□□□ -1.17
ABCA3Q99758 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 RNA5SP350-201ENST00000363298 111 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 RNA5SP335-201ENST00000363817 110 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ABCA3Q99758 RNA5SP87-201ENST00000384155 118 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.75□□□□□ -1.17
ABCA3Q99758 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.75□□□□□ -1.17
ABCA3Q99758 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.75□□□□□ -1.17
ABCA3Q99758 AL606490.8-201ENST00000441624 319 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.75□□□□□ -1.17
ABCA3Q99758 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.75□□□□□ -1.17
ABCA3Q99758 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.75□□□□□ -1.17
ABCA3Q99758 AL445647.2-201ENST00000615170 130 ntBASIC7.75□□□□□ -1.17
ABCA3Q99758 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.75□□□□□ -1.17
ABCA3Q99758 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
ABCA3Q99758 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.75□□□□□ -1.17
ABCA3Q99758 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.74□□□□□ -1.17
ABCA3Q99758 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 AL157831.2-201ENST00000564681 3095 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
ABCA3Q99758 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
ABCA3Q99758 AC009804.1-201ENST00000400949 179 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 GAPDHP42-201ENST00000406848 981 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 AL390774.1-201ENST00000411924 246 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 SLC35E1P1-201ENST00000419313 864 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 AL136981.1-203ENST00000451452 3844 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 AC103563.5-201ENST00000455643 364 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 AC093890.1-201ENST00000502554 540 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.74□□□□□ -1.17
ABCA3Q99758 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.74□□□□□ -1.17
ABCA3Q99758 AP001922.4-201ENST00000526967 290 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.74□□□□□ -1.17
ABCA3Q99758 AC015720.2-201ENST00000567709 334 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 MIR5095-201ENST00000578844 88 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.74□□□□□ -1.17
ABCA3Q99758 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.74□□□□□ -1.17
ABCA3Q99758 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC7.74□□□□□ -1.17
ABCA3Q99758 AC100827.5-201ENST00000615883 426 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 LINC01739-205ENST00000641890 573 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
ABCA3Q99758 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.74□□□□□ -1.17
ABCA3Q99758 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.74□□□□□ -1.17
ABCA3Q99758 UGT2B27P-201ENST00000505092 1620 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 AF131215.2-201ENST00000531549 1710 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
ABCA3Q99758 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 AC022905.1-201ENST00000503430 3048 ntBASIC7.74□□□□□ -1.17
ABCA3Q99758 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ABCA3Q99758 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
ABCA3Q99758 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 RN7SKP104-201ENST00000362605 328 ntBASIC7.73□□□□□ -1.17
ABCA3Q99758 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 AC019205.1-201ENST00000421830 730 ntBASIC7.73□□□□□ -1.17
ABCA3Q99758 RBMY2QP-201ENST00000429799 1147 ntBASIC7.73□□□□□ -1.17
ABCA3Q99758 RPL7L1P9-201ENST00000431298 745 ntBASIC7.73□□□□□ -1.17
ABCA3Q99758 RPS11P7-201ENST00000442125 465 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms