Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
SNX18Q96RF0 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6□□□□□ -1.45
SNX18Q96RF0 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6□□□□□ -1.45
SNX18Q96RF0 RN7SKP184-201ENST00000362348 333 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 RNU6-697P-201ENST00000363348 107 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 RNU6-1331P-201ENST00000363658 106 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 RNU6-1000P-201ENST00000391066 106 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 U3.23-201ENST00000391132 200 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 RNA5SP474-201ENST00000391234 90 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6□□□□□ -1.45
SNX18Q96RF0 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6□□□□□ -1.45
SNX18Q96RF0 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6□□□□□ -1.45
SNX18Q96RF0 AP002345.1-201ENST00000456493 928 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6□□□□□ -1.45
SNX18Q96RF0 RN7SL654P-201ENST00000479178 292 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 RPL23AP73-201ENST00000492507 471 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 NAMPTP2-201ENST00000505629 1115 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6□□□□□ -1.45
SNX18Q96RF0 HMGB1P47-201ENST00000511281 589 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 IGLV3-6-201ENST00000523937 250 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6□□□□□ -1.45
SNX18Q96RF0 AP002004.1-206ENST00000532441 876 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6□□□□□ -1.45
SNX18Q96RF0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6□□□□□ -1.45
SNX18Q96RF0 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 NPM1P5-201ENST00000557228 838 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 AC010547.7-201ENST00000570323 333 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6□□□□□ -1.45
SNX18Q96RF0 AP001496.3-201ENST00000580230 913 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 WDR45BP1-201ENST00000583470 1029 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 MIMT1-201ENST00000597105 1050 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 AC112220.2-201ENST00000605513 533 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 AC018926.1-201ENST00000616335 435 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 AC079298.2-201ENST00000623885 459 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 AC007683.2-201ENST00000624681 714 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 TMEM30CP-203ENST00000637814 1035 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6□□□□□ -1.45
SNX18Q96RF0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6□□□□□ -1.45
SNX18Q96RF0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 CASC19-238ENST00000641523 1558 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6□□□□□ -1.45
SNX18Q96RF0 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 CUL4AP1-201ENST00000514750 1863 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SNX18Q96RF0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6□□□□□ -1.45
SNX18Q96RF0 AL161912.4-201ENST00000623889 2468 ntBASIC6□□□□□ -1.45
SNX18Q96RF0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
SNX18Q96RF0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6□□□□□ -1.45
SNX18Q96RF0 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX18Q96RF0 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX18Q96RF0 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX18Q96RF0 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX18Q96RF0 RBPJP6-201ENST00000411556 1431 ntBASIC5.99□□□□□ -1.45
SNX18Q96RF0 CAP1P2-201ENST00000417455 1409 ntBASIC5.99□□□□□ -1.45
SNX18Q96RF0 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX18Q96RF0 AC106754.1-201ENST00000562632 1513 ntBASIC5.99□□□□□ -1.45
SNX18Q96RF0 AL049634.1-201ENST00000453770 1720 ntBASIC5.99□□□□□ -1.45
SNX18Q96RF0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX18Q96RF0 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX18Q96RF0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX18Q96RF0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.99□□□□□ -1.45
SNX18Q96RF0 AC009220.2-201ENST00000489759 1751 ntBASIC5.99□□□□□ -1.45
SNX18Q96RF0 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX18Q96RF0 AC120036.2-201ENST00000509729 1474 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms