Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.81□□□□□ -1
CCDC85AQ96PX6 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.81□□□□□ -1
CCDC85AQ96PX6 OR4G1P-202ENST00000641173 1788 ntBASIC8.81□□□□□ -1
CCDC85AQ96PX6 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 FGG-205ENST00000407946 1636 ntTSL 5 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 FAM204BP-201ENST00000369171 701 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 AL034417.1-201ENST00000399343 800 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 SEPT7P8-201ENST00000413308 775 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 OR51P1P-201ENST00000447547 942 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 RPL31P11-202ENST00000454082 372 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 PSPC1P2-201ENST00000455130 225 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 CEACAMP11-201ENST00000455211 583 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 RPL5P11-201ENST00000498068 893 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 AC008837.1-201ENST00000511513 412 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 NDUFB4P12-201ENST00000513465 390 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 AC133963.2-201ENST00000513686 578 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 AC067904.2-201ENST00000517322 1283 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 AC068802.1-201ENST00000603420 732 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 AL135786.2-201ENST00000608422 615 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 AC131235.4-201ENST00000609288 620 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 AL357140.4-201ENST00000636827 412 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 AL596275.2-207ENST00000641188 675 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 OR8A1-204ENST00000642111 1145 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 TPTE2P2-201ENST00000403471 1466 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 AC018688.1-201ENST00000636528 1754 ntBASIC8.8□□□□□ -1
CCDC85AQ96PX6 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CCDC85AQ96PX6 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
CCDC85AQ96PX6 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 AL133264.1-201ENST00000407157 562 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 AL590084.1-201ENST00000407885 387 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 NPM1P36-201ENST00000415681 835 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 GLUD1P9-201ENST00000420997 1173 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 ZDHHC20P2-201ENST00000424108 429 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 RPL3P11-201ENST00000434028 1146 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 MRPL35P2-201ENST00000448009 511 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 SCARNA6-201ENST00000515982 265 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 MTND4LP26-201ENST00000518144 282 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC8.79□□□□□ -1
CCDC85AQ96PX6 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 AC021483.2-201ENST00000567415 758 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 AC022662.1-201ENST00000580252 331 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.79□□□□□ -1
CCDC85AQ96PX6 AP003392.5-201ENST00000607857 415 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 AC063962.1-201ENST00000608199 521 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 AC017083.3-201ENST00000609955 700 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 AL158063.1-201ENST00000615349 536 ntBASIC8.79□□□□□ -1
CCDC85AQ96PX6 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms