Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AC092967.1-201ENST00000449016 481 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 CEACAMP11-201ENST00000455211 583 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 GM2AP2-201ENST00000491764 562 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 RPL17P2-201ENST00000491913 451 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 SNRPCP11-201ENST00000492453 205 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 MTND6P8-201ENST00000503471 522 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 NPM1P21-201ENST00000513394 762 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 SETP12-201ENST00000514068 805 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AC138517.1-201ENST00000515724 568 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 CYCSP25-201ENST00000525280 316 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AC009729.1-201ENST00000548873 1133 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AC018558.5-201ENST00000565840 952 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AL590410.1-201ENST00000617925 333 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 MIR7159-201ENST00000620587 66 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC068446.1-201ENST00000556425 1549 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AL731532.1-201ENST00000623972 4236 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC083899.2-201ENST00000423285 1376 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 SNORD8-201ENST00000363915 110 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC002127.1-201ENST00000421305 225 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 MTND4LP7-201ENST00000431728 294 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AL590399.4-201ENST00000436561 601 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AL606490.8-201ENST00000441624 319 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC009237.1-201ENST00000442127 744 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 MORF4L1P4-201ENST00000450245 976 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC099670.1-201ENST00000455141 783 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC004890.1-201ENST00000461005 181 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC010343.2-201ENST00000510162 224 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 Vault.2-201ENST00000516519 98 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 NPM1P5-201ENST00000557228 838 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC026898.1-201ENST00000586404 571 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AL589863.1-201ENST00000595383 631 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AL589765.6-201ENST00000601909 549 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC024589.2-201ENST00000605642 1294 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 SNORA74.4-201ENST00000607595 199 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms