Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC099676.1-201ENST00000608886 657 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC012488.1-201ENST00000611221 640 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC005962.2-201ENST00000611427 652 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 FAM27E3-202ENST00000614611 340 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 MLECP1-201ENST00000615893 709 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AL158801.5-201ENST00000623123 465 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC006453.3-201ENST00000635891 377 ntBASIC8.77□□□□□ -1.01
LRCH3Q96II8 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC8.77□□□□□ -1.01
LRCH3Q96II8 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
LRCH3Q96II8 DLEU1-212ENST00000469754 2955 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 DPH3-204ENST00000488423 3131 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC008124.1-201ENST00000609803 9730 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 RBMX2P2-201ENST00000257020 946 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 RN7SKP173-201ENST00000362821 315 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 TRAV35-201ENST00000390462 330 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 RN7SKP279-201ENST00000411383 298 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 RPL35AP24-201ENST00000413846 330 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC092647.1-201ENST00000420654 287 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 C4orf51-201ENST00000438731 932 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC069213.3-201ENST00000454858 474 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 RPS4XP12-201ENST00000461747 709 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 RN7SL168P-201ENST00000463821 279 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AP000797.1-201ENST00000478870 387 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC010486.1-201ENST00000511793 424 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AP002748.2-201ENST00000528671 348 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC005832.3-201ENST00000537929 631 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC139085.1-201ENST00000582716 182 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 STX8P1-201ENST00000603161 355 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC005084.1-201ENST00000605160 304 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC012510.1-201ENST00000607946 759 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC087821.2-201ENST00000637086 450 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 SERPINE2-203ENST00000409840 2569 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 WASF5P-205ENST00000428639 1455 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 ANKRD62P1-201ENST00000434304 1623 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
LRCH3Q96II8 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
LRCH3Q96II8 AC011453.1-201ENST00000597619 2239 ntBASIC8.76□□□□□ -1.01
LRCH3Q96II8 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC074198.1-201ENST00000506546 1397 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC008522.1-201ENST00000639479 2906 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 NHSL2-208ENST00000639939 3402 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 GLDCP1-201ENST00000510885 2678 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AL449403.2-201ENST00000624497 2662 ntTSL 2 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 EEF1A1P16-201ENST00000325349 1414 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms