Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC114728.1-201ENST00000488289 483 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 OR5D2P-201ENST00000524390 911 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AC079905.1-201ENST00000549280 475 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AC007956.1-201ENST00000555623 542 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AC090651.1-201ENST00000567865 634 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AC090236.2-201ENST00000587933 1101 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AC108865.2-201ENST00000606881 432 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 MIR6809-201ENST00000612189 116 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AL157762.1-201ENST00000619612 415 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 PSG10P-201ENST00000501199 1500 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC016583.1-201ENST00000624221 2431 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 GNL2P1-201ENST00000451274 2190 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 FUNDC2P3-201ENST00000334716 533 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 GAPDHP75-201ENST00000433910 943 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AL138899.2-201ENST00000439139 499 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AL445466.1-201ENST00000448432 357 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC005077.1-201ENST00000449226 375 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 CST12P-201ENST00000457644 362 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC025458.1-201ENST00000506046 166 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 RN7SKP238-201ENST00000516483 249 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC027369.2-201ENST00000528030 440 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC079315.1-201ENST00000602952 623 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC108673.3-201ENST00000609183 335 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC245014.3-201ENST00000618589 347 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AL136228.1-201ENST00000622221 319 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC009120.7-201ENST00000623452 780 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 AC099654.11-201ENST00000638857 294 ntBASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.09□□□□□ -1.43
ECHDC3Q96DC8 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ECHDC3Q96DC8 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.09□□□□□ -1.44
ECHDC3Q96DC8 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ECHDC3Q96DC8 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
ECHDC3Q96DC8 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 RBPJP7-201ENST00000442803 1447 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 RBPJP5-201ENST00000449433 1447 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 ZNF969P-201ENST00000510345 2341 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AC007114.2-201ENST00000576014 4281 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 RNFT1P3-201ENST00000340898 1052 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 SNORA70H-201ENST00000383910 135 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 SNORA70J-201ENST00000384182 135 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AC015977.1-201ENST00000418887 292 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 RPS17P17-201ENST00000419392 409 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms