Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 MARK3P1-201ENST00000604796 643 ntBASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 AP000894.4-201ENST00000610185 483 ntBASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 MIR6745-201ENST00000612694 127 ntBASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 PFN1P2-202ENST00000621347 397 ntBASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 AC010338.1-201ENST00000621823 717 ntBASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 AC099063.3-201ENST00000642066 185 ntBASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 NBPF25P-201ENST00000606775 2019 ntBASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LYSMD3Q7Z3D4 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.84□□□□□ -1.16
LYSMD3Q7Z3D4 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
LYSMD3Q7Z3D4 SAMM50P1-201ENST00000455403 1399 ntBASIC7.84□□□□□ -1.16
LYSMD3Q7Z3D4 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.16
LYSMD3Q7Z3D4 HSPD1P4-201ENST00000547203 1702 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 PSG10P-201ENST00000501199 1500 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 OR9G4-201ENST00000302957 984 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 CCNG1P1-201ENST00000406783 885 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 RN7SKP285-201ENST00000410137 318 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 TAF13P2-201ENST00000416876 286 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 RPL4P4-201ENST00000422486 1284 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 FDPSP8-201ENST00000438304 1089 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 UBE2V1P3-201ENST00000439651 417 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC239860.1-201ENST00000444680 1270 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC013267.1-201ENST00000458227 267 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 HSPE1P10-201ENST00000508631 558 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC006960.3-201ENST00000561845 705 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC012182.1-201ENST00000570133 895 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AL391840.1-201ENST00000571144 367 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 MIR4793-201ENST00000577502 87 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 BNIP3P26-201ENST00000600827 554 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC103881.1-201ENST00000603476 538 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AL021368.3-201ENST00000607119 578 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AC106028.5-201ENST00000610332 395 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 MIR6761-201ENST00000617899 72 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 LINC01739-205ENST00000641890 573 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 AL096816.1-201ENST00000623300 2920 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 EPS15P1-202ENST00000459691 2071 ntBASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
LYSMD3Q7Z3D4 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms