Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN1BQ07699 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SCN1BQ07699 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN1BQ07699 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
SCN1BQ07699 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN1BQ07699 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
SCN1BQ07699 AC024651.2-201ENST00000562480 2098 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCN1BQ07699 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN1BQ07699 AC020656.2-201ENST00000613291 5309 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN1BQ07699 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN1BQ07699 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN1BQ07699 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN1BQ07699 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN1BQ07699 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN1BQ07699 AC010132.2-201ENST00000295493 1043 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN1BQ07699 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCN1BQ07699 MT-RNR1-201ENST00000389680 954 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 RNA5SP105-201ENST00000391123 113 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCN1BQ07699 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN1BQ07699 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN1BQ07699 UBE2V1P14-201ENST00000415815 558 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN1BQ07699 RPS10P14-201ENST00000440748 502 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 RSL24D1P2-201ENST00000445584 366 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN1BQ07699 OSTCP1-201ENST00000455507 450 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 AC022415.1-202ENST00000486612 523 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN1BQ07699 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN1BQ07699 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN1BQ07699 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN1BQ07699 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.6□□□□□ -1.51
SCN1BQ07699 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN1BQ07699 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN1BQ07699 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.6□□□□□ -1.51
SCN1BQ07699 FCGR1CP-201ENST00000579737 1127 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN1BQ07699 AL031429.2-201ENST00000602605 649 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 NDUFB9P1-201ENST00000604683 510 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 AL133406.3-201ENST00000606817 541 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 AC004241.3-201ENST00000611728 517 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 MIR6737-201ENST00000617385 70 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 RMST_5.1-201ENST00000618704 126 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 AP001264.1-201ENST00000620602 703 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 AC114546.4-201ENST00000624413 369 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 AC099654.6-201ENST00000636487 512 ntBASIC5.6□□□□□ -1.51
SCN1BQ07699 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN1BQ07699 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN1BQ07699 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN1BQ07699 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCN1BQ07699 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN1BQ07699 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SCN1BQ07699 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN1BQ07699 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.6□□□□□ -1.51
SCN1BQ07699 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 AL161912.4-201ENST00000623889 2468 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN1BQ07699 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN1BQ07699 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SCN1BQ07699 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SCN1BQ07699 AC007342.5-201ENST00000571340 2142 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN1BQ07699 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 AC133552.1-201ENST00000569988 4007 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN1BQ07699 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SCN1BQ07699 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN1BQ07699 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.59□□□□□ -1.51
SCN1BQ07699 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN1BQ07699 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.59□□□□□ -1.51
SCN1BQ07699 RN7SKP117-201ENST00000410175 264 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 SNORA79B-201ENST00000410557 148 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 RPS20P25-201ENST00000412447 352 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 AC015977.1-201ENST00000418887 292 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 GLUD1P9-201ENST00000420997 1173 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 SPATA20P1-201ENST00000423089 438 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN1BQ07699 AL592114.2-201ENST00000440142 532 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 RPL7AP71-201ENST00000451120 739 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 RPS10P28-201ENST00000480396 498 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 AC105391.1-201ENST00000503155 1045 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 AC008868.1-201ENST00000509786 737 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 SNORA48.9-201ENST00000516419 162 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.59□□□□□ -1.51
SCN1BQ07699 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms