Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL049870.4-201ENST00000555741 486 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.11□□□□□ -1.43
NKX6-1P78426 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 AC018558.5-201ENST00000565840 952 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.11□□□□□ -1.43
NKX6-1P78426 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.11□□□□□ -1.43
NKX6-1P78426 AL390877.1-201ENST00000605704 214 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AC009974.1-201ENST00000608881 455 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AC093673.2-201ENST00000609674 331 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AL161420.1-201ENST00000619393 264 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 AL158062.1-201ENST00000619632 745 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.11□□□□□ -1.43
NKX6-1P78426 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NKX6-1P78426 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.11□□□□□ -1.43
NKX6-1P78426 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.11□□□□□ -1.43
NKX6-1P78426 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.11□□□□□ -1.43
NKX6-1P78426 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.11□□□□□ -1.43
NKX6-1P78426 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.11□□□□□ -1.43
NKX6-1P78426 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.11□□□□□ -1.43
NKX6-1P78426 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NKX6-1P78426 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NKX6-1P78426 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.1□□□□□ -1.43
NKX6-1P78426 CYP2G2P-201ENST00000594920 1485 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 SNORD56.4-201ENST00000363883 71 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 RN7SKP250-201ENST00000363924 321 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 RNU1-24P-201ENST00000364285 165 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX6-1P78426 RNU6-1005P-201ENST00000384519 107 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 CHMP1B2P-201ENST00000399581 597 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 RNU4-74P-201ENST00000411280 161 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.1□□□□□ -1.43
NKX6-1P78426 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX6-1P78426 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX6-1P78426 RPL18AP14-201ENST00000417685 526 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 CHCHD3P1-201ENST00000425516 676 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 AC093422.3-201ENST00000428506 305 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 GAPDHP19-201ENST00000431768 1005 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 RPL5P10-201ENST00000445207 894 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 AC069540.1-201ENST00000446320 988 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 AL009048.1-201ENST00000450437 298 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 PSMA6P2-201ENST00000457574 686 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 CST12P-201ENST00000457644 362 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX6-1P78426 RN7SKP198-201ENST00000459286 306 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 RPL23AP8-201ENST00000479812 475 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 AC021146.5-201ENST00000503544 545 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.1□□□□□ -1.43
NKX6-1P78426 UGT2A3P7-201ENST00000510485 734 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX6-1P78426 OR9G2P-201ENST00000533326 880 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 AC124891.1-201ENST00000536322 519 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.1□□□□□ -1.43
NKX6-1P78426 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX6-1P78426 MIR3135A-201ENST00000578460 77 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.1□□□□□ -1.43
NKX6-1P78426 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.1□□□□□ -1.43
NKX6-1P78426 AC104184.1-201ENST00000607513 721 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.1□□□□□ -1.43
NKX6-1P78426 RN7SL126P-201ENST00000616400 299 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.1□□□□□ -1.43
NKX6-1P78426 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 AC132825.7-201ENST00000638744 335 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
NKX6-1P78426 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.1□□□□□ -1.43
NKX6-1P78426 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
NKX6-1P78426 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 AC092701.1-201ENST00000623627 1551 ntBASIC6.1□□□□□ -1.43
NKX6-1P78426 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NKX6-1P78426 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NKX6-1P78426 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms