Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 PRR13P5-201ENST00000596581 442 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AC092032.1-201ENST00000603090 165 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AL078624.2-201ENST00000605063 554 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.49□□□□□ -1.37
GFRA1P56159 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.49□□□□□ -1.37
GFRA1P56159 Z69908.1-201ENST00000622603 247 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
GFRA1P56159 AL356585.10-201ENST00000641883 123 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
GFRA1P56159 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
GFRA1P56159 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.48□□□□□ -1.37
GFRA1P56159 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.48□□□□□ -1.37
GFRA1P56159 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.48□□□□□ -1.37
GFRA1P56159 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
GFRA1P56159 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 MT-TP-201ENST00000387461 68 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
GFRA1P56159 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.48□□□□□ -1.37
GFRA1P56159 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.48□□□□□ -1.37
GFRA1P56159 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.48□□□□□ -1.37
GFRA1P56159 RN7SKP166-201ENST00000410812 305 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.48□□□□□ -1.37
GFRA1P56159 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.48□□□□□ -1.37
GFRA1P56159 AC009500.1-201ENST00000420684 583 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.48□□□□□ -1.37
GFRA1P56159 AC092646.1-201ENST00000427142 901 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AL365220.1-201ENST00000432923 399 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.48□□□□□ -1.37
GFRA1P56159 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.48□□□□□ -1.37
GFRA1P56159 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.48□□□□□ -1.37
GFRA1P56159 YWHAZP7-201ENST00000436906 631 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.48□□□□□ -1.37
GFRA1P56159 AC114755.4-201ENST00000439114 443 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 MTCYBP34-201ENST00000439552 670 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 CALM1P2-201ENST00000452941 448 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.48□□□□□ -1.37
GFRA1P56159 PSPC1P2-201ENST00000455130 225 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 RPL35AP19-201ENST00000469425 329 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AC091982.1-202ENST00000473923 343 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AC066616.1-201ENST00000486795 413 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.48□□□□□ -1.37
GFRA1P56159 AC084024.2-201ENST00000503480 791 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.48□□□□□ -1.37
GFRA1P56159 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.48□□□□□ -1.37
GFRA1P56159 RNA5SP518-201ENST00000515957 119 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.48□□□□□ -1.37
GFRA1P56159 AC018992.1-201ENST00000523778 2149 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.48□□□□□ -1.37
GFRA1P56159 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
GFRA1P56159 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.48□□□□□ -1.37
GFRA1P56159 MIR5010-201ENST00000582846 120 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.48□□□□□ -1.37
GFRA1P56159 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.48□□□□□ -1.37
GFRA1P56159 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.48□□□□□ -1.37
GFRA1P56159 AL591222.2-201ENST00000604443 754 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AC122710.3-201ENST00000606566 541 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.48□□□□□ -1.37
GFRA1P56159 AP003108.4-201ENST00000623917 878 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.48□□□□□ -1.37
GFRA1P56159 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.48□□□□□ -1.37
GFRA1P56159 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 AC018688.1-201ENST00000636528 1754 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 AC008555.1-201ENST00000561778 2757 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 SGO1P1-201ENST00000603525 1447 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
GFRA1P56159 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
GFRA1P56159 KYNUP2-201ENST00000582280 1329 ntBASIC6.48□□□□□ -1.37
GFRA1P56159 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms