Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX2P48431 MIR3159-201ENST00000584572 74 ntBASIC5.65□□□□□ -1.5
SOX2P48431 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX2P48431 AC091057.3-201ENST00000602684 733 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AC073333.2-201ENST00000603589 769 ntBASIC5.65□□□□□ -1.5
SOX2P48431 DIMT1P1-201ENST00000603970 763 ntBASIC5.65□□□□□ -1.5
SOX2P48431 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX2P48431 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX2P48431 AC068787.1-201ENST00000623908 691 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AC073488.9-201ENST00000631601 754 ntBASIC5.65□□□□□ -1.5
SOX2P48431 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX2P48431 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX2P48431 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SOX2P48431 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SOX2P48431 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
SOX2P48431 AC005725.1-201ENST00000577346 2607 ntBASIC5.65□□□□□ -1.51
SOX2P48431 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SOX2P48431 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.65□□□□□ -1.51
SOX2P48431 AL645568.2-201ENST00000432815 1337 ntBASIC5.65□□□□□ -1.51
SOX2P48431 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
SOX2P48431 AC005261.6-201ENST00000623072 1387 ntBASIC5.65□□□□□ -1.51
SOX2P48431 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.65□□□□□ -1.51
SOX2P48431 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
SOX2P48431 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.65□□□□□ -1.51
SOX2P48431 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SOX2P48431 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.65□□□□□ -1.51
SOX2P48431 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SOX2P48431 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.65□□□□□ -1.51
SOX2P48431 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.64□□□□□ -1.51
SOX2P48431 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SOX2P48431 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX2P48431 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SOX2P48431 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SOX2P48431 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX2P48431 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX2P48431 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX2P48431 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX2P48431 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX2P48431 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SOX2P48431 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SOX2P48431 RN7SKP1-201ENST00000365525 307 ntBASIC5.64□□□□□ -1.51
SOX2P48431 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SOX2P48431 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX2P48431 AL451046.1-201ENST00000406097 534 ntBASIC5.64□□□□□ -1.51
SOX2P48431 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SOX2P48431 U3.43-201ENST00000410734 213 ntBASIC5.64□□□□□ -1.51
SOX2P48431 RN7SKP30-201ENST00000411373 334 ntBASIC5.64□□□□□ -1.51
SOX2P48431 RANP4-201ENST00000413361 655 ntBASIC5.64□□□□□ -1.51
SOX2P48431 ARL2BPP3-201ENST00000421226 480 ntBASIC5.64□□□□□ -1.51
SOX2P48431 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX2P48431 MRPS21P3-201ENST00000436696 262 ntBASIC5.64□□□□□ -1.51
SOX2P48431 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX2P48431 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 AL451063.1-201ENST00000450164 1133 ntBASIC5.64□□□□□ -1.51
SOX2P48431 RAB28P2-201ENST00000454299 641 ntBASIC5.64□□□□□ -1.51
SOX2P48431 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 RN7SL149P-201ENST00000465197 281 ntBASIC5.64□□□□□ -1.51
SOX2P48431 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX2P48431 AC099340.1-201ENST00000475247 599 ntBASIC5.64□□□□□ -1.51
SOX2P48431 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX2P48431 AC098862.1-201ENST00000504991 413 ntBASIC5.64□□□□□ -1.51
SOX2P48431 AC097460.2-201ENST00000511857 741 ntBASIC5.64□□□□□ -1.51
SOX2P48431 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 AC104115.2-201ENST00000523026 687 ntBASIC5.64□□□□□ -1.51
SOX2P48431 OR56A7P-201ENST00000524865 941 ntBASIC5.64□□□□□ -1.51
SOX2P48431 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.64□□□□□ -1.51
SOX2P48431 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 SETP17-201ENST00000534163 817 ntBASIC5.64□□□□□ -1.51
SOX2P48431 AC007068.2-201ENST00000543168 395 ntBASIC5.64□□□□□ -1.51
SOX2P48431 NOP56P3-201ENST00000549457 385 ntBASIC5.64□□□□□ -1.51
SOX2P48431 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX2P48431 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 WDR45BP1-201ENST00000583470 1029 ntBASIC5.64□□□□□ -1.51
SOX2P48431 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 AL357094.1-201ENST00000603845 844 ntBASIC5.64□□□□□ -1.51
SOX2P48431 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX2P48431 AC009120.7-201ENST00000623452 780 ntBASIC5.64□□□□□ -1.51
SOX2P48431 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX2P48431 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 MAPK10-287ENST00000641217 3037 ntBASIC5.64□□□□□ -1.51
SOX2P48431 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX2P48431 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SOX2P48431 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX2P48431 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms