Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 Y_RNA.11-201ENST00000362375 109 ntBASIC7.83□□□□□ -1.16
SOX11P35716 RNU6-1066P-201ENST00000363573 105 ntBASIC7.83□□□□□ -1.16
SOX11P35716 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.83□□□□□ -1.16
SOX11P35716 MIR654-201ENST00000385199 81 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.83□□□□□ -1.16
SOX11P35716 AC068533.2-201ENST00000411872 306 ntBASIC7.83□□□□□ -1.16
SOX11P35716 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.83□□□□□ -1.16
SOX11P35716 HMGB3P23-201ENST00000414981 585 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AL390840.1-201ENST00000420303 988 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.83□□□□□ -1.16
SOX11P35716 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC7.83□□□□□ -1.16
SOX11P35716 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC7.83□□□□□ -1.16
SOX11P35716 MYO5BP3-201ENST00000431872 1279 ntBASIC7.83□□□□□ -1.16
SOX11P35716 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.83□□□□□ -1.16
SOX11P35716 KDM4A-AS1-203ENST00000434346 833 ntTSL 5 BASIC7.83□□□□□ -1.16
SOX11P35716 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.83□□□□□ -1.16
SOX11P35716 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.83□□□□□ -1.16
SOX11P35716 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 CLUHP5-201ENST00000438421 774 ntBASIC7.83□□□□□ -1.16
SOX11P35716 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC7.83□□□□□ -1.16
SOX11P35716 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC7.83□□□□□ -1.16
SOX11P35716 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.83□□□□□ -1.16
SOX11P35716 MTND3P10-201ENST00000450967 341 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC098824.1-201ENST00000453565 980 ntBASIC7.83□□□□□ -1.16
SOX11P35716 RN7SL706P-201ENST00000460079 292 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC010307.1-201ENST00000467206 836 ntBASIC7.83□□□□□ -1.16
SOX11P35716 RN7SL146P-201ENST00000472338 297 ntBASIC7.83□□□□□ -1.16
SOX11P35716 RN7SL368P-201ENST00000473384 277 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AP000797.1-201ENST00000478870 387 ntBASIC7.83□□□□□ -1.16
SOX11P35716 RPL17P37-201ENST00000490729 548 ntBASIC7.83□□□□□ -1.16
SOX11P35716 MYADML-203ENST00000491596 951 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC023424.2-201ENST00000493479 777 ntBASIC7.83□□□□□ -1.16
SOX11P35716 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.83□□□□□ -1.16
SOX11P35716 AC112203.1-201ENST00000506315 1020 ntBASIC7.83□□□□□ -1.16
SOX11P35716 MAST4-IT1-201ENST00000514241 658 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC7.83□□□□□ -1.16
SOX11P35716 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 AC239860.2-201ENST00000525886 270 ntBASIC7.83□□□□□ -1.16
SOX11P35716 OR8Q1P-201ENST00000526467 655 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AP003499.1-201ENST00000527217 574 ntBASIC7.83□□□□□ -1.16
SOX11P35716 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC7.83□□□□□ -1.16
SOX11P35716 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.83□□□□□ -1.16
SOX11P35716 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.83□□□□□ -1.16
SOX11P35716 AC060766.2-201ENST00000588235 334 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC005262.1-201ENST00000588562 362 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.83□□□□□ -1.16
SOX11P35716 AC010487.1-201ENST00000594408 1172 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC7.83□□□□□ -1.16
SOX11P35716 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC7.83□□□□□ -1.16
SOX11P35716 AC112230.1-201ENST00000604342 547 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AL121890.2-201ENST00000617644 465 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7.83□□□□□ -1.16
SOX11P35716 AC091953.4-201ENST00000625179 341 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC026108.1-201ENST00000635444 547 ntBASIC7.83□□□□□ -1.16
SOX11P35716 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.83□□□□□ -1.16
SOX11P35716 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.83□□□□□ -1.16
SOX11P35716 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.83□□□□□ -1.16
SOX11P35716 CTAGE3P-201ENST00000454280 2404 ntBASIC7.83□□□□□ -1.16
SOX11P35716 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
SOX11P35716 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC7.83□□□□□ -1.16
SOX11P35716 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC7.83□□□□□ -1.16
SOX11P35716 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SOX11P35716 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SOX11P35716 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SOX11P35716 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.82□□□□□ -1.16
SOX11P35716 AC107982.1-201ENST00000507171 1300 ntBASIC7.82□□□□□ -1.16
SOX11P35716 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SOX11P35716 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SOX11P35716 ASNSP6-201ENST00000592770 1618 ntBASIC7.82□□□□□ -1.16
SOX11P35716 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.82□□□□□ -1.16
SOX11P35716 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.82□□□□□ -1.16
SOX11P35716 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
SOX11P35716 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SOX11P35716 SNORA62.2-201ENST00000364672 152 ntBASIC7.82□□□□□ -1.16
SOX11P35716 SNORA73A-201ENST00000364938 206 ntBASIC7.82□□□□□ -1.16
SOX11P35716 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SOX11P35716 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SOX11P35716 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
SOX11P35716 TMSB4XP8-201ENST00000402089 135 ntBASIC7.82□□□□□ -1.16
SOX11P35716 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC7.82□□□□□ -1.16
SOX11P35716 OR51A3P-201ENST00000413596 924 ntBASIC7.82□□□□□ -1.16
SOX11P35716 RPL12P27-201ENST00000414870 496 ntBASIC7.82□□□□□ -1.16
SOX11P35716 TMSB4XP6-201ENST00000415187 135 ntBASIC7.82□□□□□ -1.16
SOX11P35716 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC7.82□□□□□ -1.16
SOX11P35716 AL389915.1-201ENST00000422463 466 ntBASIC7.82□□□□□ -1.16
SOX11P35716 AC009480.2-201ENST00000422916 432 ntBASIC7.82□□□□□ -1.16
SOX11P35716 TMSB4XP1-201ENST00000424567 135 ntBASIC7.82□□□□□ -1.16
SOX11P35716 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms