Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC079841.1-201ENST00000481228 950 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.03□□□□□ -1.28
COL4A5P29400 RPEP1-201ENST00000504507 658 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 OR5D15P-201ENST00000531671 942 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A5P29400 AC126177.5-201ENST00000549599 178 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 AC015720.2-201ENST00000567709 334 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
COL4A5P29400 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
COL4A5P29400 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.02□□□□□ -1.28
COL4A5P29400 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A5P29400 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A5P29400 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
COL4A5P29400 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A5P29400 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A5P29400 AC137056.2-201ENST00000624055 1958 ntBASIC7.02□□□□□ -1.29
COL4A5P29400 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A5P29400 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
COL4A5P29400 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
COL4A5P29400 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.02□□□□□ -1.29
COL4A5P29400 AOX3P-204ENST00000491025 2107 ntBASIC7.02□□□□□ -1.29
COL4A5P29400 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
COL4A5P29400 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
COL4A5P29400 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A5P29400 RNA5SP350-201ENST00000363298 111 ntBASIC7.02□□□□□ -1.29
COL4A5P29400 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.02□□□□□ -1.29
COL4A5P29400 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.02□□□□□ -1.29
COL4A5P29400 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.02□□□□□ -1.29
COL4A5P29400 NENFP1-201ENST00000419476 466 ntBASIC7.02□□□□□ -1.29
COL4A5P29400 RPL7L1P9-201ENST00000431298 745 ntBASIC7.02□□□□□ -1.29
COL4A5P29400 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.02□□□□□ -1.29
COL4A5P29400 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.02□□□□□ -1.29
COL4A5P29400 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.02□□□□□ -1.29
COL4A5P29400 MIR5095-201ENST00000578844 88 ntBASIC7.02□□□□□ -1.29
COL4A5P29400 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.02□□□□□ -1.29
COL4A5P29400 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.02□□□□□ -1.29
COL4A5P29400 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.02□□□□□ -1.29
COL4A5P29400 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A5P29400 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.02□□□□□ -1.29
COL4A5P29400 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A5P29400 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.02□□□□□ -1.29
COL4A5P29400 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.02□□□□□ -1.29
COL4A5P29400 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A5P29400 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
COL4A5P29400 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A5P29400 AC092724.1-201ENST00000624623 3397 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A5P29400 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
COL4A5P29400 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A5P29400 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL4A5P29400 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
COL4A5P29400 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.01□□□□□ -1.29
COL4A5P29400 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
COL4A5P29400 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A5P29400 AL662795.2-201ENST00000624252 3706 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
COL4A5P29400 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A5P29400 AL133270.1-201ENST00000402635 279 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 VDAC1P2-201ENST00000423609 850 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A5P29400 Z80107.2-201ENST00000445127 392 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A5P29400 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A5P29400 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.01□□□□□ -1.29
COL4A5P29400 IGHV1-14-201ENST00000523391 241 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.01□□□□□ -1.29
COL4A5P29400 RBM22P12-201ENST00000567098 1255 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 OR1F2P-201ENST00000570470 933 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 MIR3691-201ENST00000578066 90 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.01□□□□□ -1.29
COL4A5P29400 AC133644.2-201ENST00000608142 540 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 MIR6837-201ENST00000620884 64 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A5P29400 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL4A5P29400 FBXL21-201ENST00000297158 1305 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A5P29400 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL4A5P29400 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
COL4A5P29400 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.01□□□□□ -1.29
COL4A5P29400 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A5P29400 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A5P29400 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL4A5P29400 MAPK10-365ENST00000641902 3825 ntBASIC7.01□□□□□ -1.29
COL4A5P29400 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7□□□□□ -1.29
COL4A5P29400 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
COL4A5P29400 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL4A5P29400 MIR223-201ENST00000385204 110 ntBASIC7□□□□□ -1.29
COL4A5P29400 FABP12P1-201ENST00000401911 322 ntBASIC7□□□□□ -1.29
COL4A5P29400 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7□□□□□ -1.29
COL4A5P29400 AC015983.1-201ENST00000441577 373 ntBASIC7□□□□□ -1.29
COL4A5P29400 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
COL4A5P29400 RPS21P4-201ENST00000487122 248 ntBASIC7□□□□□ -1.29
COL4A5P29400 IGLV2-34-201ENST00000490007 283 ntBASIC7□□□□□ -1.29
COL4A5P29400 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7□□□□□ -1.29
COL4A5P29400 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7□□□□□ -1.29
COL4A5P29400 AC004825.1-201ENST00000555068 586 ntBASIC7□□□□□ -1.29
COL4A5P29400 AC007494.1-201ENST00000562293 760 ntBASIC7□□□□□ -1.29
COL4A5P29400 AC010245.2-201ENST00000606908 1167 ntBASIC7□□□□□ -1.29
COL4A5P29400 AL118522.2-201ENST00000616045 615 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms