Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC8.04□□□□□ -1.12
VARSP26640 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
VARSP26640 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC8.04□□□□□ -1.12
VARSP26640 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC8.04□□□□□ -1.12
VARSP26640 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.04□□□□□ -1.12
VARSP26640 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
VARSP26640 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 RNU6-877P-201ENST00000383868 107 ntBASIC8.04□□□□□ -1.12
VARSP26640 MIR1184-2-201ENST00000408263 99 ntBASIC8.04□□□□□ -1.12
VARSP26640 MIR1184-1-201ENST00000408606 99 ntBASIC8.04□□□□□ -1.12
VARSP26640 MIR1184-3-201ENST00000408676 99 ntBASIC8.04□□□□□ -1.12
VARSP26640 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.04□□□□□ -1.12
VARSP26640 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 BTF3P9-201ENST00000418784 283 ntBASIC8.04□□□□□ -1.12
VARSP26640 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC8.04□□□□□ -1.12
VARSP26640 TIMM9P3-201ENST00000428659 274 ntBASIC8.04□□□□□ -1.12
VARSP26640 RPS28P8-201ENST00000435020 208 ntBASIC8.04□□□□□ -1.12
VARSP26640 AC242426.1-201ENST00000435270 960 ntBASIC8.04□□□□□ -1.12
VARSP26640 RPS25P9-201ENST00000435591 252 ntBASIC8.04□□□□□ -1.12
VARSP26640 CFL1P8-201ENST00000436148 475 ntBASIC8.04□□□□□ -1.12
VARSP26640 FUNDC2P4-201ENST00000441207 421 ntBASIC8.04□□□□□ -1.12
VARSP26640 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.04□□□□□ -1.12
VARSP26640 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.04□□□□□ -1.12
VARSP26640 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC8.04□□□□□ -1.12
VARSP26640 AC108463.1-201ENST00000450258 347 ntBASIC8.04□□□□□ -1.12
VARSP26640 USP9YP12-201ENST00000450481 570 ntBASIC8.04□□□□□ -1.12
VARSP26640 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC8.04□□□□□ -1.12
VARSP26640 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC8.04□□□□□ -1.12
VARSP26640 AL035407.2-201ENST00000454090 378 ntBASIC8.04□□□□□ -1.12
VARSP26640 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.04□□□□□ -1.12
VARSP26640 ACTR3BP4-201ENST00000503033 1244 ntBASIC8.04□□□□□ -1.12
VARSP26640 AC111000.3-201ENST00000508057 576 ntBASIC8.04□□□□□ -1.12
VARSP26640 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC8.04□□□□□ -1.12
VARSP26640 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC8.04□□□□□ -1.12
VARSP26640 IGLV7-35-201ENST00000523314 340 ntBASIC8.04□□□□□ -1.12
VARSP26640 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC8.04□□□□□ -1.12
VARSP26640 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC8.04□□□□□ -1.12
VARSP26640 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC8.04□□□□□ -1.12
VARSP26640 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
VARSP26640 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC8.04□□□□□ -1.12
VARSP26640 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC8.04□□□□□ -1.12
VARSP26640 HMGB1P33-201ENST00000563485 527 ntBASIC8.04□□□□□ -1.12
VARSP26640 RN7SL619P-201ENST00000581753 258 ntBASIC8.04□□□□□ -1.12
VARSP26640 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC8.04□□□□□ -1.12
VARSP26640 AC073091.2-201ENST00000603205 907 ntBASIC8.04□□□□□ -1.12
VARSP26640 AC010385.2-201ENST00000603743 490 ntBASIC8.04□□□□□ -1.12
VARSP26640 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC8.04□□□□□ -1.12
VARSP26640 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC8.04□□□□□ -1.12
VARSP26640 RNU6ATAC35P-201ENST00000609276 444 ntBASIC8.04□□□□□ -1.12
VARSP26640 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.04□□□□□ -1.12
VARSP26640 AC023158.2-201ENST00000614876 543 ntBASIC8.04□□□□□ -1.12
VARSP26640 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC8.04□□□□□ -1.12
VARSP26640 AC239859.6-201ENST00000622095 213 ntBASIC8.04□□□□□ -1.12
VARSP26640 AC009093.6-201ENST00000622268 553 ntBASIC8.04□□□□□ -1.12
VARSP26640 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC8.04□□□□□ -1.12
VARSP26640 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC8.04□□□□□ -1.12
VARSP26640 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
VARSP26640 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 EEF1A1P20-201ENST00000514852 1386 ntBASIC8.04□□□□□ -1.12
VARSP26640 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
VARSP26640 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VARSP26640 AC007614.2-201ENST00000569877 1851 ntBASIC8.04□□□□□ -1.12
VARSP26640 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
VARSP26640 MITF-202ENST00000314589 1993 ntTSL 2 BASIC8.04□□□□□ -1.12
VARSP26640 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
VARSP26640 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.04□□□□□ -1.12
VARSP26640 AL513523.1-201ENST00000417868 1309 ntBASIC8.03□□□□□ -1.12
VARSP26640 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 MTCO1P9-201ENST00000505577 1534 ntBASIC8.03□□□□□ -1.12
VARSP26640 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
VARSP26640 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.03□□□□□ -1.12
VARSP26640 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.03□□□□□ -1.12
VARSP26640 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.03□□□□□ -1.12
VARSP26640 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 AL034370.1-201ENST00000397254 1590 ntBASIC8.03□□□□□ -1.12
VARSP26640 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC8.03□□□□□ -1.12
VARSP26640 OR9K2-201ENST00000305377 1122 ntBASIC8.03□□□□□ -1.12
VARSP26640 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
VARSP26640 SNORA73A-201ENST00000364938 206 ntBASIC8.03□□□□□ -1.12
VARSP26640 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
VARSP26640 RNU6-248P-201ENST00000410720 107 ntBASIC8.03□□□□□ -1.12
VARSP26640 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC8.03□□□□□ -1.12
VARSP26640 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC8.03□□□□□ -1.12
VARSP26640 RBM22P7-201ENST00000421321 280 ntBASIC8.03□□□□□ -1.12
VARSP26640 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.03□□□□□ -1.12
VARSP26640 VN1R20P-201ENST00000425215 966 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms