Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CSB-PGBD3P0DP91 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
CSB-PGBD3P0DP91 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC9.15□□□□□ -0.95
CSB-PGBD3P0DP91 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
CSB-PGBD3P0DP91 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
CSB-PGBD3P0DP91 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
CSB-PGBD3P0DP91 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CSB-PGBD3P0DP91 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
CSB-PGBD3P0DP91 IFIT1P1-201ENST00000400497 1449 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 RN7SKP237-201ENST00000364663 301 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 PSMA6P1-201ENST00000400275 741 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 PSMD10P2-201ENST00000432890 672 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC046176.1-201ENST00000435260 1170 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 PFN1P11-201ENST00000445829 389 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 RPL23AP28-201ENST00000448062 470 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC091860.1-201ENST00000505723 432 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 NPM1P5-201ENST00000557228 838 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC009094.1-201ENST00000564443 426 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC104073.3-201ENST00000610942 955 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AC019080.5-201ENST00000624891 757 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 CASC19-212ENST00000641153 1287 ntBASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CSB-PGBD3P0DP91 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 RNFT1P3-201ENST00000340898 1052 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 RNA5SP512-201ENST00000364550 120 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 MIR513B-201ENST00000385136 84 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 RNA5SP431-201ENST00000410312 120 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 RPS7P2-201ENST00000435134 607 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AC114755.4-201ENST00000439114 443 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 NAP1L1P3-201ENST00000462291 880 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 MTND4LP3-201ENST00000468320 276 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 RPSAP37-201ENST00000470913 821 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AP002884.1-201ENST00000479691 655 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 HMGN1P16-201ENST00000508308 283 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AC146944.3-201ENST00000509969 371 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms