Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.77□□□□□ -1.33
MMP3P08254 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.77□□□□□ -1.33
MMP3P08254 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.77□□□□□ -1.33
MMP3P08254 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
MMP3P08254 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.77□□□□□ -1.33
MMP3P08254 AC023141.9-201ENST00000458734 412 ntBASIC6.77□□□□□ -1.33
MMP3P08254 AC073594.1-201ENST00000462065 364 ntBASIC6.77□□□□□ -1.33
MMP3P08254 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.77□□□□□ -1.33
MMP3P08254 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.77□□□□□ -1.33
MMP3P08254 SNORA48.9-201ENST00000516419 162 ntBASIC6.77□□□□□ -1.33
MMP3P08254 RNU6-551P-201ENST00000516661 103 ntBASIC6.77□□□□□ -1.33
MMP3P08254 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.77□□□□□ -1.33
MMP3P08254 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.77□□□□□ -1.33
MMP3P08254 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.77□□□□□ -1.33
MMP3P08254 PCNAP4-201ENST00000532690 730 ntBASIC6.77□□□□□ -1.33
MMP3P08254 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.77□□□□□ -1.33
MMP3P08254 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.77□□□□□ -1.33
MMP3P08254 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.77□□□□□ -1.33
MMP3P08254 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.77□□□□□ -1.33
MMP3P08254 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MMP3P08254 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MMP3P08254 RPL12P48-201ENST00000605620 304 ntBASIC6.77□□□□□ -1.33
MMP3P08254 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.77□□□□□ -1.33
MMP3P08254 AL118556.2-201ENST00000614375 824 ntBASIC6.77□□□□□ -1.33
MMP3P08254 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.77□□□□□ -1.33
MMP3P08254 AC092111.1-201ENST00000618256 3358 ntBASIC6.77□□□□□ -1.33
MMP3P08254 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.77□□□□□ -1.33
MMP3P08254 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MMP3P08254 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
MMP3P08254 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MMP3P08254 AC011815.2-201ENST00000618230 2021 ntBASIC6.77□□□□□ -1.33
MMP3P08254 AC105749.1-201ENST00000631338 2008 ntBASIC6.77□□□□□ -1.33
MMP3P08254 AC110373.1-201ENST00000505994 3505 ntBASIC6.77□□□□□ -1.33
MMP3P08254 ZNF969P-201ENST00000510345 2341 ntBASIC6.77□□□□□ -1.33
MMP3P08254 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.77□□□□□ -1.33
MMP3P08254 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MMP3P08254 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.77□□□□□ -1.33
MMP3P08254 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
MMP3P08254 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.77□□□□□ -1.33
MMP3P08254 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MMP3P08254 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
MMP3P08254 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
MMP3P08254 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
MMP3P08254 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MMP3P08254 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.76□□□□□ -1.33
MMP3P08254 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
MMP3P08254 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
MMP3P08254 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
MMP3P08254 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
MMP3P08254 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
MMP3P08254 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MMP3P08254 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
MMP3P08254 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
MMP3P08254 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
MMP3P08254 RPS3AP2-201ENST00000407190 754 ntBASIC6.76□□□□□ -1.33
MMP3P08254 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.76□□□□□ -1.33
MMP3P08254 RN7SKP161-201ENST00000411110 305 ntBASIC6.76□□□□□ -1.33
MMP3P08254 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.76□□□□□ -1.33
MMP3P08254 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.76□□□□□ -1.33
MMP3P08254 UBE2V2P3-201ENST00000433562 437 ntBASIC6.76□□□□□ -1.33
MMP3P08254 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.76□□□□□ -1.33
MMP3P08254 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.76□□□□□ -1.33
MMP3P08254 AC009237.1-201ENST00000442127 744 ntBASIC6.76□□□□□ -1.33
MMP3P08254 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.76□□□□□ -1.33
MMP3P08254 AC064862.4-201ENST00000442180 334 ntBASIC6.76□□□□□ -1.33
MMP3P08254 BMS1P10-201ENST00000443754 1120 ntBASIC6.76□□□□□ -1.33
MMP3P08254 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.76□□□□□ -1.33
MMP3P08254 AC023245.1-201ENST00000468501 517 ntBASIC6.76□□□□□ -1.33
MMP3P08254 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
MMP3P08254 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.76□□□□□ -1.33
MMP3P08254 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.76□□□□□ -1.33
MMP3P08254 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.76□□□□□ -1.33
MMP3P08254 AC112191.2-201ENST00000522428 333 ntBASIC6.76□□□□□ -1.33
MMP3P08254 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.76□□□□□ -1.33
MMP3P08254 AL356801.1-201ENST00000559320 294 ntBASIC6.76□□□□□ -1.33
MMP3P08254 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.76□□□□□ -1.33
MMP3P08254 AC020765.1-201ENST00000604296 328 ntBASIC6.76□□□□□ -1.33
MMP3P08254 RN7SL787P-201ENST00000613000 284 ntBASIC6.76□□□□□ -1.33
MMP3P08254 AL021918.2-201ENST00000613415 194 ntBASIC6.76□□□□□ -1.33
MMP3P08254 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.76□□□□□ -1.33
MMP3P08254 NEPNP-201ENST00000404786 1371 ntBASIC6.76□□□□□ -1.33
MMP3P08254 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
MMP3P08254 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.76□□□□□ -1.33
MMP3P08254 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MMP3P08254 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
MMP3P08254 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
MMP3P08254 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
MMP3P08254 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MMP3P08254 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
MMP3P08254 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.76□□□□□ -1.33
MMP3P08254 AL359091.1-201ENST00000449048 1734 ntBASIC6.76□□□□□ -1.33
MMP3P08254 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MMP3P08254 WDR95P-201ENST00000425638 1542 ntBASIC6.76□□□□□ -1.33
MMP3P08254 MTND5P12-201ENST00000502851 1449 ntBASIC6.76□□□□□ -1.33
MMP3P08254 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
MMP3P08254 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
MMP3P08254 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MMP3P08254 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.75□□□□□ -1.33
MMP3P08254 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
MMP3P08254 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms