Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX1O00570 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX1O00570 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.59□□□□□ -1.19
SOX1O00570 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
SOX1O00570 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SOX1O00570 ATP5F1P3-201ENST00000397213 657 ntBASIC7.59□□□□□ -1.19
SOX1O00570 AL589994.1-201ENST00000404962 340 ntBASIC7.59□□□□□ -1.19
SOX1O00570 AL590635.1-201ENST00000406314 586 ntBASIC7.59□□□□□ -1.19
SOX1O00570 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX1O00570 NPM1P36-201ENST00000415681 835 ntBASIC7.59□□□□□ -1.19
SOX1O00570 GLUD1P9-201ENST00000420997 1173 ntBASIC7.59□□□□□ -1.19
SOX1O00570 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX1O00570 BX119321.1-201ENST00000428912 797 ntBASIC7.59□□□□□ -1.19
SOX1O00570 AC005099.1-201ENST00000442083 610 ntBASIC7.59□□□□□ -1.19
SOX1O00570 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX1O00570 VN1R38P-201ENST00000450265 887 ntBASIC7.59□□□□□ -1.19
SOX1O00570 BX323845.2-201ENST00000458382 234 ntBASIC7.59□□□□□ -1.19
SOX1O00570 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.59□□□□□ -1.19
SOX1O00570 RPL23AP44-201ENST00000482216 473 ntBASIC7.59□□□□□ -1.19
SOX1O00570 RNU6-319P-201ENST00000516025 108 ntBASIC7.59□□□□□ -1.19
SOX1O00570 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX1O00570 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX1O00570 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX1O00570 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX1O00570 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX1O00570 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
SOX1O00570 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.59□□□□□ -1.19
SOX1O00570 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.59□□□□□ -1.19
SOX1O00570 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX1O00570 RSL24D1P11-201ENST00000591045 491 ntBASIC7.59□□□□□ -1.19
SOX1O00570 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX1O00570 AP000403.1-201ENST00000603349 851 ntBASIC7.59□□□□□ -1.19
SOX1O00570 AC012175.1-201ENST00000603755 531 ntBASIC7.59□□□□□ -1.19
SOX1O00570 AC063962.1-201ENST00000608199 521 ntBASIC7.59□□□□□ -1.19
SOX1O00570 AC092653.1-201ENST00000608509 531 ntBASIC7.59□□□□□ -1.19
SOX1O00570 AC072039.2-201ENST00000608883 439 ntBASIC7.59□□□□□ -1.19
SOX1O00570 VN1R74P-201ENST00000613259 503 ntBASIC7.59□□□□□ -1.19
SOX1O00570 AC022467.1-201ENST00000614738 749 ntBASIC7.59□□□□□ -1.19
SOX1O00570 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
SOX1O00570 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX1O00570 AC036108.4-201ENST00000611654 2516 ntBASIC7.59□□□□□ -1.19
SOX1O00570 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SOX1O00570 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX1O00570 SND1-IT1-201ENST00000623342 2481 ntBASIC7.59□□□□□ -1.19
SOX1O00570 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX1O00570 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.59□□□□□ -1.19
SOX1O00570 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.59□□□□□ -1.19
SOX1O00570 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SOX1O00570 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
SOX1O00570 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 CCDC162P-202ENST00000368966 6751 ntBASIC7.58□□□□□ -1.2
SOX1O00570 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
SOX1O00570 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
SOX1O00570 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 AC007406.5-201ENST00000570140 3170 ntBASIC7.58□□□□□ -1.2
SOX1O00570 AL391666.1-201ENST00000442570 2764 ntBASIC7.58□□□□□ -1.2
SOX1O00570 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC7.58□□□□□ -1.2
SOX1O00570 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX1O00570 Y_RNA.6-201ENST00000362350 114 ntBASIC7.58□□□□□ -1.2
SOX1O00570 RNU5E-4P-201ENST00000364931 120 ntBASIC7.58□□□□□ -1.2
SOX1O00570 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.58□□□□□ -1.2
SOX1O00570 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 AC007563.3-201ENST00000433233 371 ntBASIC7.58□□□□□ -1.2
SOX1O00570 RPS27P5-201ENST00000444247 244 ntBASIC7.58□□□□□ -1.2
SOX1O00570 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 AL096803.2-201ENST00000450032 677 ntBASIC7.58□□□□□ -1.2
SOX1O00570 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 MTCYBP1-201ENST00000454315 1119 ntBASIC7.58□□□□□ -1.2
SOX1O00570 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 RPSAP37-201ENST00000470913 821 ntBASIC7.58□□□□□ -1.2
SOX1O00570 PPIAP19-201ENST00000486414 492 ntBASIC7.58□□□□□ -1.2
SOX1O00570 LINC00888-204ENST00000487386 421 ntBASIC7.58□□□□□ -1.2
SOX1O00570 FAM177A1P1-201ENST00000503598 473 ntBASIC7.58□□□□□ -1.2
SOX1O00570 SNORA74.1-201ENST00000516320 180 ntBASIC7.58□□□□□ -1.2
SOX1O00570 RNA5SP287-201ENST00000516358 103 ntBASIC7.58□□□□□ -1.2
SOX1O00570 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.58□□□□□ -1.2
SOX1O00570 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SOX1O00570 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.58□□□□□ -1.2
SOX1O00570 OR4A1P-201ENST00000532342 920 ntBASIC7.58□□□□□ -1.2
SOX1O00570 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.58□□□□□ -1.2
SOX1O00570 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX1O00570 MIR4789-201ENST00000577469 82 ntBASIC7.58□□□□□ -1.2
SOX1O00570 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX1O00570 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX1O00570 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX1O00570 CBX3P2-202ENST00000583365 535 ntBASIC7.58□□□□□ -1.2
SOX1O00570 AC015688.2-201ENST00000584523 262 ntBASIC7.58□□□□□ -1.2
SOX1O00570 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SOX1O00570 AL121809.2-201ENST00000613169 341 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms