Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.54□□□□□ -1.36
O00370 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.54□□□□□ -1.36
O00370 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.54□□□□□ -1.36
O00370 MRPS21P8-201ENST00000569196 235 ntBASIC6.54□□□□□ -1.36
O00370 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
O00370 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.54□□□□□ -1.36
O00370 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
O00370 GLYATL1P2-202ENST00000588046 902 ntBASIC6.54□□□□□ -1.36
O00370 MIR6780B-201ENST00000610307 79 ntBASIC6.54□□□□□ -1.36
O00370 AL596275.2-207ENST00000641188 675 ntBASIC6.54□□□□□ -1.36
O00370 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
O00370 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.54□□□□□ -1.36
O00370 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.54□□□□□ -1.36
O00370 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.54□□□□□ -1.36
O00370 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
O00370 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
O00370 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.54□□□□□ -1.36
O00370 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
O00370 AC024587.1-201ENST00000505925 2157 ntBASIC6.54□□□□□ -1.36
O00370 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.54□□□□□ -1.36
O00370 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.54□□□□□ -1.36
O00370 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
O00370 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.54□□□□□ -1.36
O00370 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.54□□□□□ -1.36
O00370 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
O00370 AL359091.1-201ENST00000449048 1734 ntBASIC6.53□□□□□ -1.36
O00370 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
O00370 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
O00370 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
O00370 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
O00370 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.53□□□□□ -1.36
O00370 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.53□□□□□ -1.36
O00370 TRAV35-201ENST00000390462 330 ntBASIC6.53□□□□□ -1.36
O00370 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
O00370 RPL7AP14-201ENST00000424041 802 ntBASIC6.53□□□□□ -1.36
O00370 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.53□□□□□ -1.36
O00370 PSMD10P2-201ENST00000432890 672 ntBASIC6.53□□□□□ -1.36
O00370 AC079922.1-201ENST00000443291 359 ntBASIC6.53□□□□□ -1.36
O00370 AL512593.1-201ENST00000444758 779 ntBASIC6.53□□□□□ -1.36
O00370 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.53□□□□□ -1.36
O00370 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.53□□□□□ -1.36
O00370 AC112187.1-201ENST00000455837 479 ntBASIC6.53□□□□□ -1.36
O00370 snoU13.29-201ENST00000459370 104 ntBASIC6.53□□□□□ -1.36
O00370 RN7SL254P-201ENST00000460609 284 ntBASIC6.53□□□□□ -1.36
O00370 AC104339.1-201ENST00000465478 348 ntBASIC6.53□□□□□ -1.36
O00370 PPP1R11P1-201ENST00000486095 376 ntBASIC6.53□□□□□ -1.36
O00370 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.53□□□□□ -1.36
O00370 AC108103.1-201ENST00000511286 446 ntBASIC6.53□□□□□ -1.36
O00370 MAST4-IT1-201ENST00000514241 658 ntBASIC6.53□□□□□ -1.36
O00370 AC021269.1-201ENST00000526860 705 ntBASIC6.53□□□□□ -1.36
O00370 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.53□□□□□ -1.36
O00370 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.53□□□□□ -1.36
O00370 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.53□□□□□ -1.36
O00370 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.53□□□□□ -1.36
O00370 MIR3154-201ENST00000577829 84 ntBASIC6.53□□□□□ -1.36
O00370 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
O00370 AC020916.2-201ENST00000591242 360 ntBASIC6.53□□□□□ -1.36
O00370 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.53□□□□□ -1.36
O00370 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.53□□□□□ -1.36
O00370 MIR6806-201ENST00000622141 64 ntBASIC6.53□□□□□ -1.36
O00370 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.53□□□□□ -1.36
O00370 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
O00370 AL161901.1-201ENST00000624954 3425 ntBASIC6.53□□□□□ -1.36
O00370 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
O00370 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
O00370 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
O00370 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
O00370 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
O00370 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
O00370 AL132656.3-201ENST00000606384 1595 ntBASIC6.52□□□□□ -1.36
O00370 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
O00370 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 AC005261.2-201ENST00000593427 4258 ntBASIC6.52□□□□□ -1.37
O00370 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 AC027575.3-201ENST00000583058 2747 ntBASIC6.52□□□□□ -1.37
O00370 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.52□□□□□ -1.37
O00370 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.52□□□□□ -1.37
O00370 SNORA21-201ENST00000362423 132 ntBASIC6.52□□□□□ -1.37
O00370 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 AL354707.3-201ENST00000427308 331 ntBASIC6.52□□□□□ -1.37
O00370 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.52□□□□□ -1.37
O00370 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.52□□□□□ -1.37
O00370 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.52□□□□□ -1.37
O00370 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.52□□□□□ -1.37
O00370 HSD3BP3-201ENST00000514706 994 ntBASIC6.52□□□□□ -1.37
O00370 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 AC002519.2-203ENST00000567043 837 ntBASIC6.52□□□□□ -1.37
O00370 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.52□□□□□ -1.37
O00370 AC124916.2-201ENST00000604416 224 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms