Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AL023284.3-201ENST00000407767 334 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC096644.3-201ENST00000416788 338 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 CYCSP52-201ENST00000422857 310 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AL389925.1-201ENST00000432257 728 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 PNKDP1-201ENST00000435914 430 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC094085.1-201ENST00000468914 584 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC090568.1-201ENST00000509499 856 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC117525.1-201ENST00000515228 503 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 SNORA26.10-201ENST00000516427 141 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 IGKV1D-22-201ENST00000518953 324 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AL136520.1-202ENST00000555494 763 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AP005136.2-201ENST00000583253 1049 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC016542.1-201ENST00000608259 493 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 FAM27E2-201ENST00000619668 403 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 AC139426.3-201ENST00000605648 2059 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 CYP2G2P-201ENST00000594920 1485 ntBASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
TBC1D3FA6NER0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 RN7SKP275-201ENST00000364626 301 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 RNA5SP122-201ENST00000384457 108 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AL691517.1-201ENST00000440833 1235 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AL590004.3-202ENST00000445883 451 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC016724.1-201ENST00000453215 421 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC098847.1-201ENST00000473094 348 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 RN7SL326P-201ENST00000477493 296 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 SNORA58-201ENST00000505219 137 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 OR7E99P-201ENST00000505750 922 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 RNU6-760P-201ENST00000516078 97 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 RN7SKP35-201ENST00000517210 151 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 COX6B1P4-201ENST00000519826 484 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC090826.1-203ENST00000569235 490 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AL080312.2-201ENST00000613001 630 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC253576.2-201ENST00000618815 580 ntBASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms