Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 KHDC1P1-201ENST00000511053 508 ntBASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 AC093816.1-201ENST00000515076 913 ntBASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 SETP3-201ENST00000581726 813 ntBASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 AC096586.2-201ENST00000610260 441 ntBASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 AC119674.1-202ENST00000641333 1860 ntBASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TCRBV7S3A2A0A539 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 RNA5SP485-201ENST00000365053 119 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 MIR7-1-201ENST00000384871 110 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 YWHAZP4-201ENST00000392459 708 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AL096800.1-201ENST00000405326 893 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 ZFAND6P1-201ENST00000434138 605 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 SUMO2P19-201ENST00000518920 295 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AC124891.1-201ENST00000536322 519 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 TDGP1-201ENST00000543961 1229 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AC122134.1-202ENST00000569111 1201 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 AC089999.3-201ENST00000622440 577 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.22□□□□□ -1.41
TCRBV7S3A2A0A539 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.21□□□□□ -1.41
TCRBV7S3A2A0A539 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TCRBV7S3A2A0A539 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TCRBV7S3A2A0A539 AC024651.2-201ENST00000562480 2098 ntBASIC6.21□□□□□ -1.41
TCRBV7S3A2A0A539 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TCRBV7S3A2A0A539 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AL121977.1-201ENST00000401636 979 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AL360013.1-201ENST00000419031 858 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 RPS3AP38-201ENST00000435889 763 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 RPS19P6-201ENST00000441327 433 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 PA2G4P1-201ENST00000442248 1197 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 POU5F1P5-201ENST00000445059 658 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 RPS15AP29-201ENST00000445539 400 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AL162739.1-201ENST00000450606 307 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 RAB28P2-201ENST00000454299 641 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 MTND2P39-201ENST00000457230 764 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 RN7SL502P-201ENST00000481857 290 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 ATG10-AS1-201ENST00000504846 648 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms